Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00017438 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030131.1 |
| NCBI id | CM030131.1 |
| chromosome length | 33043351 |
| location | 3908513 ~ 3909212 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00017438 | True | 666 | mRNA | 0.43 | 3 | 3908513 | 3909212 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017437 | NA | coding | downstream | 25 | 3907452 ~ 3908488 (-) |
| AMCG00017432 | ctnna2,LOC107552348,LOC103137937,LOC107706127 | coding | downstream | 109041 | 3776494 ~ 3799472 (-) |
| AMCG00017434 | ctnna2,ctnna1,LOC107594905,LOC107750356 | coding | downstream | 160670 | 3737813 ~ 3747843 (-) |
| AMCG00017431 | ctnna2,LOC102793143,LOC107706127,LOC103137875 | coding | downstream | 369117 | 3529683 ~ 3539396 (-) |
| AMCG00017430 | ctnna2 | coding | downstream | 420988 | 3429621 ~ 3487525 (-) |
| AMCG00017436 | NA | coding | upstream | 294474 | 4203686 ~ 4204261 (-) |
| AMCG00017435 | NA | coding | upstream | 333236 | 4242448 ~ 4270086 (-) |
| AMCG00017433 | smox,LOC102778491 | coding | upstream | 372272 | 4281484 ~ 4299779 (-) |
| AMCG00017442 | fbxo41 | coding | upstream | 501670 | 4410882 ~ 4439595 (-) |
| AMCG00017444 | NA | coding | upstream | 551307 | 4460519 ~ 4461277 (-) |
| G90281 | NA | non-coding | downstream | 223299 | 3672295 ~ 3685214 (-) |
| G90255 | LOC100846954 | non-coding | downstream | 503747 | 3404486 ~ 3404766 (-) |
| G90252 | NA | non-coding | downstream | 553024 | 3355065 ~ 3355489 (-) |
| G90244 | NA | non-coding | downstream | 968370 | 2939935 ~ 2940143 (-) |
| G90243 | NA | non-coding | downstream | 969036 | 2939250 ~ 2939477 (-) |
| G90287 | NA | non-coding | upstream | 45676 | 3954888 ~ 3955136 (-) |
| G90289 | NA | non-coding | upstream | 132475 | 4041687 ~ 4041894 (-) |
| G90307 | NA | non-coding | upstream | 293395 | 4202607 ~ 4202807 (-) |
| G90354 | NA | non-coding | upstream | 437774 | 4346986 ~ 4347291 (-) |
| G90355 | NA | non-coding | upstream | 438882 | 4348094 ~ 4348312 (-) |
| AMCG00017426 | NA | other | downstream | 1066619 | 2711302 ~ 2841894 (-) |
| AMCG00017418 | NA | other | downstream | 1292951 | 2601783 ~ 2615562 (-) |
| AMCG00017384 | LOC106911887,LOC104963986 | other | downstream | 3556727 | 160054 ~ 351786 (-) |
| G89804 | NA | other | downstream | 3802628 | 105685 ~ 105885 (-) |
| G90400 | NA | other | upstream | 633563 | 4542775 ~ 4544760 (-) |
| G90501 | NA | other | upstream | 1249172 | 5158384 ~ 5221021 (-) |
| G90502 | NA | other | upstream | 1313261 | 5222473 ~ 5223047 (-) |
| G90715 | fat4,LOC106611628,LOC106604622 | other | upstream | 2478040 | 6387252 ~ 6389038 (-) |
| G90746 | NA | other | upstream | 2824023 | 6733235 ~ 7188648 (-) |
