Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00017726 |
| gene name | LOC102788851,LOC106608629 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030131.1 |
| NCBI id | CM030131.1 |
| chromosome length | 33043351 |
| location | 19973418 ~ 19986615 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00017726 | True | 477 | mRNA | 0.46 | 4 | 19973418 | 19986615 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017727 | ppp3ca | coding | downstream | 18606 | 19948192 ~ 19954812 (-) |
| AMCG00017724 | ddit4l | coding | downstream | 82889 | 19888936 ~ 19890529 (-) |
| AMCG00017728 | NA | coding | downstream | 103961 | 19868999 ~ 19869457 (-) |
| AMCG00017720 | NA | coding | downstream | 163290 | 19696553 ~ 19810128 (-) |
| AMCG00017716 | rpl34,LOC107566275 | coding | downstream | 313890 | 19656933 ~ 19659528 (-) |
| AMCG00017731 | nfib,LOC106608626 | coding | upstream | 407262 | 20393877 ~ 20408258 (-) |
| AMCG00017729 | NA | coding | upstream | 471600 | 20458215 ~ 20482752 (-) |
| AMCG00017736 | tmod1,LOC102782831 | coding | upstream | 511652 | 20498267 ~ 20514665 (-) |
| AMCG00017734 | LOC103364796,LOC106608959 | coding | upstream | 533603 | 20520218 ~ 20550836 (-) |
| AMCG00017738 | NA | coding | upstream | 567052 | 20553667 ~ 20571410 (-) |
| G92682 | NA | non-coding | downstream | 53266 | 19905992 ~ 19920152 (-) |
| G92660 | NA | non-coding | downstream | 105782 | 19867418 ~ 19867636 (-) |
| G92657 | NA | non-coding | downstream | 107001 | 19865972 ~ 19866417 (-) |
| G92609 | NA | non-coding | downstream | 355631 | 19613241 ~ 19617787 (-) |
| G92608 | NA | non-coding | downstream | 360236 | 19612705 ~ 19613182 (-) |
| G92714 | NA | non-coding | upstream | 428691 | 20415306 ~ 20415612 (-) |
| G92798 | NA | non-coding | upstream | 637528 | 20624143 ~ 20624420 (-) |
| G92800 | NA | non-coding | upstream | 648057 | 20634672 ~ 20634880 (-) |
| G92822 | NA | non-coding | upstream | 685450 | 20672065 ~ 20676278 (-) |
| G92823 | NA | non-coding | upstream | 690044 | 20676659 ~ 20734422 (-) |
| G92591 | nansa,LOC108416893,LOC108416857,LOC107723182 | other | downstream | 554062 | 19412987 ~ 19419356 (-) |
| G92436 | NA | other | downstream | 1510242 | 18462784 ~ 18463176 (-) |
| AMCG00017675 | NA | other | downstream | 2183669 | 17781648 ~ 17789749 (-) |
| AMCG00017665 | NA | other | downstream | 2485921 | 17468605 ~ 17487497 (-) |
| AMCG00017663 | NA | other | downstream | 2578369 | 17387484 ~ 17395049 (-) |
| AMCG00017725 | NA | other | upstream | 315385 | 20302000 ~ 20358625 (-) |
| AMCG00017780 | LOC101079287,LOC106577738,LOC100690429,LOC105925506,LOC108244244 | other | upstream | 3331478 | 23318093 ~ 23321954 (-) |
| AMCG00017819 | NA | other | upstream | 4278064 | 24264679 ~ 24270595 (-) |
| AMCG00017839 | NA | other | upstream | 4959480 | 24946095 ~ 24949136 (-) |
| AMCG00017844 | frmpd1b,frmpd1,LOC107750435,LOC107570223,LOC107655878 | other | upstream | 5010929 | 24997544 ~ 25018212 (-) |
