AMCG00017737 (ndufb6)


Basic Information

Item Value
gene id AMCG00017737
gene name ndufb6
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 20626084 ~ 20627983 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017737
TTGGATTTCGTTGAGCTTCACTATGTCTGGTTACACTCCGGACGAGAAGCTCCGTGTGGAGCAGCTGACAAAGCTGAGACGACAGTGGCTGAAAGACCAGGAGCTCAGTCCCAGAGAGCCCGTCCTGCCCCCTCAGAAACAGGGACCTGTGGCCAAATTCTGGTCGGGGTTTCTGGAGCCCAAGAGCTTGTGGAGGCTTTACACTTATAAAGCATACAGTGCTGGAGTGTGGACCTTTACCCGGCTAATAATCCCTGCTTGGATTGTGCACTATTATGTCAAGTACCATGTTGCTACAAAGCCGTATGCAATTGTTGAGGTGAAACCCAAGCTTTTCCCAggTGATACAGTTTTGGAAACTGGAGAGATCATTCCTTCCCTACCAGAGCAGGAAAGTCATGGGCATCACTGA

Function

symbol description
ndufb6 Predicted to be involved in mitochondrial ATP synthesis coupled electron transport. Predicted to act upstream of or within mitochondrial electron transport, NADH to ubiquinone. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of mitochondrial respiratory chain complex I. Is expressed in several structures, including adaxial cell; alar plate midbrain region; optic tectum; optic vesicle; and retina. Orthologous to human NDUFB6 (NADH:ubiquinone oxidoreductase subunit B6).

NR:

description
PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6

GO: NA

KEGG:

id description
K03962 NDUFB6; NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 6

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017737 True 412 mRNA 0.50 4 20626084 20627983

Neighbor

gene id symbol gene type direction distance location
AMCG00017741 NA coding downstream 3979 20620406 ~ 20622105 (-)
AMCG00017733 NA coding downstream 9855 20603355 ~ 20616229 (-)
AMCG00017739 mtap,LOC107595051 coding downstream 24683 20595312 ~ 20601401 (-)
AMCG00017735 mtap coding downstream 41123 20571457 ~ 20584961 (-)
AMCG00017738 NA coding downstream 54674 20553667 ~ 20571410 (-)
AMCG00017749 LOC107702147,LOC107737977 coding upstream 25162 20653145 ~ 20667672 (-)
AMCG00017748 NA coding upstream 62238 20690221 ~ 20741395 (-)
AMCG00017751 NA coding upstream 120172 20748155 ~ 20774424 (-)
AMCG00017752 LOC107591574,LOC106602091,LOC107750449,LOC101068444 coding upstream 253510 20881493 ~ 20913956 (-)
AMCG00017753 NA coding upstream 501374 21129357 ~ 21136560 (-)
G92798 NA non-coding downstream 1664 20624143 ~ 20624420 (-)
G92714 NA non-coding downstream 210472 20415306 ~ 20415612 (-)
G92682 NA non-coding downstream 705932 19905992 ~ 19920152 (-)
G92660 NA non-coding downstream 758448 19867418 ~ 19867636 (-)
G92657 NA non-coding downstream 759667 19865972 ~ 19866417 (-)
G92800 NA non-coding upstream 6689 20634672 ~ 20634880 (-)
G92822 NA non-coding upstream 44082 20672065 ~ 20676278 (-)
G92823 NA non-coding upstream 48676 20676659 ~ 20734422 (-)
G92836 NA non-coding upstream 189692 20817675 ~ 20822960 (-)
G92838 NA non-coding upstream 192483 20820466 ~ 20821995 (-)
AMCG00017725 NA other downstream 267459 20302000 ~ 20358625 (-)
G92591 nansa,LOC108416893,LOC108416857,LOC107723182 other downstream 1206728 19412987 ~ 19419356 (-)
G92436 NA other downstream 2162908 18462784 ~ 18463176 (-)
AMCG00017675 NA other downstream 2836335 17781648 ~ 17789749 (-)
AMCG00017665 NA other downstream 3138587 17468605 ~ 17487497 (-)
AMCG00017780 LOC101079287,LOC106577738,LOC100690429,LOC105925506,LOC108244244 other upstream 2690110 23318093 ~ 23321954 (-)
AMCG00017819 NA other upstream 3636696 24264679 ~ 24270595 (-)
AMCG00017839 NA other upstream 4318112 24946095 ~ 24949136 (-)
AMCG00017844 frmpd1b,frmpd1,LOC107750435,LOC107570223,LOC107655878 other upstream 4369561 24997544 ~ 25018212 (-)
AMCG00017861 LOC103354863 other upstream 5317158 25945141 ~ 25957648 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_000315 ndufb6 coding NC_007112.7 CM002885.2 26099250 ~ 26103232 (+)