AMCG00017852


Basic Information

Item Value
gene id AMCG00017852
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 25115938 ~ 25224281 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017852
ATGGGTATTCAGGCCAAGAAGCGGTGGAGGGCAAGCATGTTTGCTGGGTATGAGGCTGTGGAGGAGTACGAGGATGAGCTGTACAAGGAGCCCGAGGCCTCCAGCGAGTCGGAGCCAGACAGTGAGGTGGAGTTCCACCTGTACAGTCAGGTCCACTATGCGGCCAAAATGGGGGACGAGAGCAAAGAGGATGAGGTGCTTACCTCTGTCCAGGCGCAGCAGGATGAAGTGATCACTGTCCCATCCGATTCAGAAGTGGAGGTCATCACGGTGTCAGATGACACGGAGGGTGACGGCGTGTGTGCtgtgaaaggaagaaaaacagaggCCAGGAGGAAGGTGGGCAGTCTTGCCAACCCTACCCCCTCTGAGTTGCCCGAGTTCGTGGAGTTCGTGGAGTCCAGTGACGACTCGGACTATGTGGAGAGCTGGATGATCCTGGGCCAGGAGAAGCAGGATGAAGACAACACCATCCTGCTCAACCTAGAAGTCCACAGTAACAGCTCCCAGTCAGAAGCAGATGTTGACCTCACCACGTTGTCGGACGACTCCGTCCGGCTCAACCGAGATGTCCGCAGTGACAGGTCCCACTCTGAAGCAGgtCAGTTTGAATTCGTAGATTCACGGAGATTACCTAGTCTGGCTACAGTGTGGCCCGACAACCGCATGTGCGAAGGGTGGAGAGACTGGCGCTGGAAGGTCTCAGTGTGTTGCCTATGTGCCATGCCGGGGCACATACAATACTCCTGCCCACACAGACACTGCCCCAACTGTGGCCTGCCGGGTCACTGCTACGAGGAGTGCACCGACCGCGCCTTCTGGAACAAGCAGTGTCGGCGCTGTAGCATGACTGGACACTATGCAGACATGTGGCGCTGCACCAGCAGGGTCCCAGGTCCCCAGGGCTGCGgCTTGCCCAGAGATATGGAGACAATATCACCTAACACCGGCCTGCTGGGAGCGAGACTCGAAATCCTGCACACCGGGGACAGAGCGAAGCCCCTGCAGGGCCGCGGACATCCTGAGaCCACCCCAGGGCCTCTCGTCCAACCAGAAGGAAATGTCAGACCCAAAATCCCTGCTTACTGCTACAACTGCTCTCGAAAAGGACATTTCGGATATGAATGCACCCAGAGAAGGATGTTCAACAAGACGTTCCCCGCTCTGCCCTTCGTTACTTACTACGACACAGAGCAGGACATGCGGTCAAGAAATCACCGGCTTCAGAGGAAAGCACAAGAGCTGCGGGAAGCCGGCCTGATGCCTCAGATGGGCACGTTAGGAACGTCACATGTAGAAAGGAAACGCGAAGAACCCACGAGgaagagaataaaaaagaacaaaggatGGGAGGAGGTGGAGCAGTGGGGGGCTCAAACTTCCAAACCAAACCAACAGCAGAGGCCACAGCAGAAGATGAAGACTTGGCCGGAGAAACGCAAGGAGAGGAGGCTACAGAAGCAACAGAGGAAAAAGATTCAGGAAGGCGAAGACACCAACTTTCCCCGGGGCCCCAAGAAACCCCCGGCGGGAGGCCACAGTCACCCCAAGAAAGGCCGCCCGAGTCCAGGCCTCTTCGGTCCAGCGAAGCAGCTCACTGAGGAGACGCACAAACGGAAACGGAGGGCAAAACGCAAGAGCACAGCCGGGCAGGACCGTCACCATGAAGACAGTTACCCTGCCGACGAGAACCTCTTCCTCATCAAACAGAGATCACGGAGACGGAAGCGATAG

Function

GO: NA

KEGG:

id description
K12597 AIR1_2; protein AIR1/2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017852 True 1734 mRNA 0.57 12 25115938 25224281

Neighbor

gene id symbol gene type direction distance location
AMCG00017850 NA coding downstream 10796 25100833 ~ 25105142 (-)
AMCG00017851 NA coding downstream 15307 25095198 ~ 25100631 (-)
AMCG00017846 NA coding downstream 35507 25075605 ~ 25080431 (-)
AMCG00017845 NA coding downstream 129166 24965474 ~ 24986772 (-)
AMCG00017837 ints10 coding downstream 173305 24928171 ~ 24942633 (-)
AMCG00017855 NA coding upstream 122539 25346820 ~ 25366550 (-)
AMCG00017862 dnah6 coding upstream 598695 25822976 ~ 25923225 (-)
AMCG00017867 LOC107754176 coding upstream 808834 26033115 ~ 26049947 (-)
AMCG00017869 NA coding upstream 852447 26076728 ~ 26082767 (-)
AMCG00017870 NA coding upstream 872159 26096440 ~ 26097928 (-)
G93641 NA non-coding downstream 4848 25110890 ~ 25111090 (-)
G93639 NA non-coding downstream 8856 25106802 ~ 25107082 (-)
G93591 NA non-coding downstream 165690 24949968 ~ 24950248 (-)
G93576 NA non-coding downstream 188750 24922467 ~ 24927188 (-)
G93509 rl9,rpl9,LOC107562595,LOC107700291 non-coding downstream 385716 24725938 ~ 24730222 (-)
G93660 NA non-coding upstream 148652 25372933 ~ 25381038 (-)
G93689 NA non-coding upstream 293005 25517286 ~ 25517600 (-)
G93718 NA non-coding upstream 585263 25809544 ~ 25809853 (-)
G93802 NA non-coding upstream 1033815 26258096 ~ 26258367 (-)
G93816 NA non-coding upstream 1129236 26353517 ~ 26353724 (-)
AMCG00017844 frmpd1b,frmpd1,LOC107750435,LOC107570223,LOC107655878 other downstream 97726 24997544 ~ 25018212 (-)
AMCG00017839 NA other downstream 166802 24946095 ~ 24949136 (-)
AMCG00017819 NA other downstream 845343 24264679 ~ 24270595 (-)
AMCG00017780 LOC101079287,LOC106577738,LOC100690429,LOC105925506,LOC108244244 other downstream 1793984 23318093 ~ 23321954 (-)
AMCG00017725 NA other downstream 4757313 20302000 ~ 20358625 (-)
AMCG00017861 LOC103354863 other upstream 720860 25945141 ~ 25957648 (-)
AMCG00017866 smim19,LOC107754471,LOC106604684,LOC106611785 other upstream 788207 26012488 ~ 26015942 (-)
G93795 shisa3,LOC102786300 other upstream 879745 26104026 ~ 26107805 (-)
G93796 NA other upstream 884779 26109060 ~ 26110074 (-)
AMCG00017902 NA other upstream 2613970 27838251 ~ 27839790 (-)

Expression


Co-expression Network