AMCG00017949


Basic Information

Item Value
gene id AMCG00017949
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 30011310 ~ 30030524 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017949
ctctcacacacacacacacggagagACACAGGCTCAGACACAGCCAGCCTCAGAGCTCACAGGGTTGCCATTGCCATGCTGTGCAGCCACAGAGAGTGGAGGAAATCTTGCCCAGCGATCACAGAAGCGGGAGCTTGAGGACGGATCCACTTGGCTGTTTTTCTCGGCCTCGGGGACGCTTGGCAACCCAGGGTTTTGAAAGTTTTGCAGAAAATGATTGGGCATTGTTGAAACTTGGCTGTGGATTAGATTGCCGCCCACCCTTCCCTCCCAGCTTCTCTCGGCTCGTTTCAGTACACCTTGGTGCCGAAGACAGGATGACATGGCGCCCTCAGTACCGAAGCTCCAAATTCCGGCACGTGTTTGGCAAGCCCTCCACCAAAGAGAACTGCTACGATGGCGTGCCCATCACGAGAAGTGTCCATGACAACCATTTCTGTGCCGTCAACCCCCGCTTCATCGCTGTCATCACCGAGTGCGCCGGGGGAGGGGCTTTCCTCGTCGTTTCCCTCCACCATACGGGGAAGGTTGACCCTCATCACCCGCGTGTGTGCGGCCACAGGGGCAATGTGCTGGATGTCAAGTGGAACCCCTTCGATGACTTCTCGATCGCCTCCTGCTCAGAGGATTCAACGGTTAAAATCTGGGACATTCCTAAACATGGGATGGTGAAAAACATCACGGTTCCCAAGAAGGACCTGCAGGGCCACTCCCGAAGAGTGGGGCTCATTGAGTGGCATCCCACGGCCCGCAACGTGCTCTTCAGCACAGCCTACGACTACAAGATCATGATCTGGAACCTGGACACTCCAGATGCGGTCATTAAGAACCCCGTGAAGACCATTGGCCTCCACAGCGACCTGGTCCTCTCCATGTCCTTTAACACAGACGGCAGTCTGCTGGCCACGTCCTGCAAGGACAAGAAGATCAGGGTCATTGACCCCCGGACCACCACCCTCTTGCAGgacGACCTCTCCGTGCCTTTATTGGAAGAGGACCTGGACGGCTCCTCCGGGGTACTGTTCCCCTTCTACGATCCCGACACCCACATGCTGTACGTGGCGGGGAAGGGCGATGGCAATATCAGATACTATGAAATCAGCTCGGAGAAGCCATATGTGCAGTTCCTGGCAGAATACCGCTCGCACCTCCCTCAGAAAGGGCTGGGAACGATGCCAAAGAGAGGGCTGGACGTGTGCTCCTGCGAGGTGTTCAGGTTTTATAAGCTGGTGACAATCAAGAGCCTCATCGAACCCCTGTCCTTCATCGTGCCTCGGCGGTCGGAGTCGTACCAGGAGGACATCTACCCGATGACGGCCGGAAGTGAGCCCGCCATGACGGCCGACGAGTGGTTCAGAGGAGTGAGCAGAGGACCTATGCTGATGTCCTTGAAGCCCGGGAGTAAGATCTCCGAGTCGTGCCCCGCGCTGATGGCCACTGCGCCCCTGAGTTCGGAGCCCAAGCGCTATCAGAGCCGTCAGGGGCAGCAGGAGGTGGCCATCATCCAGGAGAGGCTGGAGACCAAAGAGCCCAAGGAGTCCAAAGCACTGAATGATTTTAAGGAGCGGCTGGAGGGCATTGACCTGGACAAGAGCCGGACTGGCGTGTCCAACGGCTGCGAGCCCCAGGCGTGCACCCCGCCCAAGACGGAGAATGAGATCCGCCGGCTGAGGGACCTCGTCAGTCAGAGGGACGTGCGGATAAAACAGCTGGAACTGGAGATCAAAAACGTGCGCAACTCCCAGGGAGCGTACTGA

Function

GO: NA

KEGG:

id description
K13887 CORO2; coronin-2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017949 True 1757 mRNA 0.58 11 30011310 30030524

Neighbor

gene id symbol gene type direction distance location
AMCG00017945 NA coding downstream 28054 29976744 ~ 29983256 (-)
AMCG00017944 trmo coding downstream 35505 29971090 ~ 29975805 (-)
AMCG00017947 NA coding downstream 44684 29965499 ~ 29966626 (-)
AMCG00017939 bnc2,LOC106933596 coding downstream 426878 29577109 ~ 29584432 (-)
AMCG00017937 bnc2,LOC107737408,LOC107737409,LOC107678088 coding downstream 466405 29538155 ~ 29544905 (-)
AMCG00017955 NA coding upstream 81766 30112290 ~ 30112964 (-)
AMCG00017954 NA coding upstream 91341 30121865 ~ 30129314 (-)
AMCG00017963 cisd2,LOC106602754 coding upstream 401679 30432203 ~ 30439609 (-)
AMCG00017967 NA coding upstream 458952 30489476 ~ 30490828 (-)
AMCG00017966 nfkb1 coding upstream 460702 30491226 ~ 30514195 (-)
G94359 NA non-coding downstream 9028 29998354 ~ 30002282 (-)
G94358 NA non-coding downstream 13797 29996249 ~ 29997513 (-)
G94337 NA non-coding downstream 96473 29911982 ~ 29914837 (-)
G94246 NA non-coding downstream 724563 29286207 ~ 29286747 (-)
G94218 NA non-coding downstream 803506 29207470 ~ 29207804 (-)
G94392 NA non-coding upstream 78447 30108971 ~ 30109182 (-)
G94483 NA non-coding upstream 425674 30456198 ~ 30461173 (-)
G94482 NA non-coding upstream 429025 30459549 ~ 30460888 (-)
G94533 NA non-coding upstream 580297 30610821 ~ 30614319 (-)
G94563 NA non-coding upstream 687828 30718352 ~ 30721502 (-)
G94238 pla2g12a,LOC108263807,LOC102792247 other downstream 738142 29269235 ~ 29273168 (-)
G94172 NA other downstream 1135387 28874161 ~ 28875923 (-)
AMCG00017906 elavl2 other downstream 1866721 28098905 ~ 28144589 (-)
AMCG00017902 NA other downstream 2171520 27838251 ~ 27839790 (-)
G93796 NA other downstream 3901236 26109060 ~ 26110074 (-)
AMCG00017972 dcaf10 other upstream 555205 30585729 ~ 30596417 (-)
G94543 NA other upstream 597464 30627988 ~ 30658493 (-)
AMCG00018000 slc1a1 other upstream 2229183 32259707 ~ 32263865 (-)
AMCG00018004 NA other upstream 2241170 32271694 ~ 32276372 (-)
AMCG00018007 NA other upstream 2254961 32285485 ~ 32308080 (-)

Expression


Co-expression Network