AMCG00018004


Basic Information

Item Value
gene id AMCG00018004
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 32271694 ~ 32276372 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018004
ATGAGAAACCTAGCGCCCACCCGGCCGGTGAGTGGAAGAGCCGGGTGCACCAGCGTTGTGCCCATGACTGTTCATCCAGAGAGAGTTGTGGCCTGTGTGGGTCTCGGGAAGCTGGTGTCCCGGCCCGGCACGCTGCTCACTTCCTGTCTTGCACCCCCCTCAGGTATCGGGCTGGGCGTTCTGGTGCGCGAGTACGGCTCCCTCTCTCAGCTGGACAAGTACTACTTCGGCTTTCCCGGGGAGATCCTGATGCGAATGCTCAAACTCATAGTCCTGCCGCTCATTATTTCGAGCATGATCTCAGAGAGGAAACACTTCTCTTGA
>TU118225
CGCACCCATTAGTGCAGCACAAGGGAGCGAGCAGGACTGACGCACACCTCGCCATTAACCTCACCATCTCTGCCAGAGCCTCCAACCTGAAGCACTgtgtctgtttgcattgcttttcagTGCATTCCTTTAatcaattaagagctcagcaTGTGGAAGAAAGCAATGTGTGGTTTCAGGAGCTTTGTCATGAGTAACTGGCTTCTGGTCTCCACCCTGAGTGCTGTGGTGTTGGGTATCGGGCTGGGCGTTCTGGTGCGCGAGTACGGCTCCCTCTCTCAGCTGGACAAGTACTACTTCGGCTTTCCCGGGGAGATCCTGATGCGAATGCTCAAACTCATAGTCCTGCCGCTCATTATTTCGAGCATGATCTCAGGAGTGGCCAGCCTGGACTCGGGGATGTCTGGCCGGATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018004 False 324 mRNA 0.59 3 32271826 32274835
TU118225 True 414 TUCP 0.54 3 32271694 32276372

Neighbor

gene id symbol gene type direction distance location
AMCG00017998 NA coding downstream 23516 32233851 ~ 32248178 (-)
AMCG00017999 zgc:136353 coding downstream 60728 32199753 ~ 32210966 (-)
AMCG00017994 NA coding downstream 97832 32164063 ~ 32173862 (-)
AMCG00017993 sepsecs coding downstream 107713 32155771 ~ 32163981 (-)
AMCG00017990 NA coding downstream 120018 32143816 ~ 32151676 (-)
AMCG00018006 LOC108437089,LOC103038323,LOC107561515,LOC107738333,LOC107691852 coding upstream 71123 32347495 ~ 32360816 (-)
AMCG00018009 NA coding upstream 104140 32380512 ~ 32381489 (-)
AMCG00018008 NA coding upstream 105178 32381550 ~ 32387686 (-)
AMCG00018015 NA coding upstream 148653 32425025 ~ 32429565 (-)
AMCG00018016 NA coding upstream 185222 32461594 ~ 32478852 (-)
G94747 NA non-coding downstream 75088 32192183 ~ 32196606 (-)
G94665 NA non-coding downstream 442894 31828459 ~ 31828800 (-)
G94655 LOC100709447,LOC101481844,LOC102214071,LOC102780160,LOC106514855,LOC108234835 non-coding downstream 530035 31741224 ~ 31741659 (-)
G94622 NA non-coding downstream 649316 31621600 ~ 31622378 (-)
G94600 NA non-coding downstream 754658 31516832 ~ 31517036 (-)
G94791 NA non-coding upstream 68878 32345250 ~ 32346583 (-)
G94927 NA non-coding upstream 513407 32789779 ~ 32790688 (-)
G94936 NA non-coding upstream 571894 32848266 ~ 32848466 (-)
AMCG00018000 slc1a1 other downstream 7829 32259707 ~ 32263865 (-)
G94543 NA other downstream 1613201 30627988 ~ 30658493 (-)
AMCG00017972 dcaf10 other downstream 1675277 30585729 ~ 30596417 (-)
G94238 pla2g12a,LOC108263807,LOC102792247 other downstream 2998526 29269235 ~ 29273168 (-)
G94172 NA other downstream 3395771 28874161 ~ 28875923 (-)
AMCG00018007 NA other upstream 9113 32285485 ~ 32308080 (-)
G94835 NA other upstream 178713 32455085 ~ 32456410 (-)
AMCG00018021 ank2,LOC106577504,LOC106608576 other upstream 324817 32601189 ~ 32605751 (-)
G94887 NA other upstream 372092 32648464 ~ 32652684 (-)
AMCG00018020 LOC105907237,LOC101472930 other upstream 379658 32656030 ~ 32665115 (-)

Expression


Co-expression Network