AMCG00018026


Basic Information

Item Value
gene id AMCG00018026
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 32841023 ~ 32845300 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018026
CAGCAGGTAAAGACACGCTACAGCCTGCAGGGACCTCCTCTGCCCCTGGATTCCTGCCCTCGGAGGGGCACAGCTCAGGCAGCCAGGGAGAGGAACGGACGCACAGGCTTTCACTCAGACAGTGATGGCCGAGAAAGAGCAGAGTACATCTCCATGCAGTCATGGAAAGGAGGATGCTGGGAACACCGAAGGCCTCGCCCACAGCCTGCAGCACCCGGAGGGGAACCGAGAACCCAGCCAGCCGTTCCCCCGCTCCCCAAACCTGGCCAGgaagcagcagagcagcccCAAGGTGGGCAGGAGGTCCGAGGCAGGGCTGTCCAGACTCCTGCAGGAGCTGAGTGAGGAGGAATCGAAAGCTTCAGCGCACATTCAGTCCCTGAAGAAGCAGAGTGCCAACCTGAACGACACGGCCGGGGCCATGAAGCAGCAGGTGAGTGACAGCTACGCGGCCCTACGGGAGGCGCTGCGGCGAGACGAGGAGGCCATGCTGCAGGCCATCGACGAGGACACCAGGGGCACCGTTGCCAAGCTGGACAAGGTGGCCAAGGATTGGAGGCAGCACCTGGCGCAGGTGCAGAAGGCCAAGGCCCACACGCAGGCCGCTCTGCAGCAGATCAAGGCCGGGACCGTCCTGCAGgacACTCCTGAGGACCAAAGCTGTCCTAAGAAAAAGGACGGTGCTGAGCAGAGCATAAAGCTGAACGAAGGCAGATTCCACAGGCTGCTGAAGATCCTGCACAACATCTCTAAGGACCTGGACACCCAACTGCAACGCAAATGTCTTCTGCTGGATTCCTCCGCTGTGACGGTGGACAGCAGCACCTGTCACAGGAGCATCACGGTGTGCCGAGACGGGCGCGGCCTGTGCTTCTCTGCCGAGCCTCAGCCCATGTCGGACTGCCCCCTGCGGTTCGACAGGGTGCGCTGCGCTCTGGGTGGCAGCGGTTTTGCCAAGGGGAGGCACTACTGGGAGGTGCAGGTGGGCTGCTGCTCAGAGTGGGCTGTGGGTGCCGCGTACGGCTGCATCGAGCGCCGGGGGAACCTGAAGGGGGCCAAGCCCGGCCGCAATCGACACTCCTGGTGCCTGGAGCTGCGCGACAGCCAGCTGTCCGCCTGGCACAACGACCGCAGCGCAGCCTGCAGGCGAGCCGGGCCCGGGGGCATCGTTCGGAGGGTGGGCGTGTTCCTGGACTACGAGAAGGGCCGCTTGGCCTTCTACAACGCCGGCACCatgcagctgctgcaggagttCTCCGGCGCCTACTCGGCCGCCTTCGACCGGATGCAGCACCAGTTCACCGAGCCACTCTTCCCTGTGTTCCGCTTCTTTCAGCCCGGGCCCGGGCAGCTTCGACCCAGCCACATGGAGATCTGCCCCCCGGAGGTCTGACTCCCTCACACTCAACAGCGTCACAGTGAGACCCACATGCACATGAATGCAATGAGTCCACAGTGTAACCCAGACGCATATTGAGAATTTGGAATCAGCCTGTTTAtagaatgtattaattgattcaAGTTAGAAGTTAGAATTCTTCTGTATATCATAGGTACTTCAACCCTCTTGAGACAGTATGCATTACATCCGTACAAGGCGGTGAGGCAGCTTTACCAGATCATCTGTGTATGGGATCGGCAGTGTTTGCTCGTGTGATCAATGCTGTGAAGCCGATACCTGGTGCTCAGAGGGGCTCACCTGTAGTCGATGTCCAGGAGCAGACTCTTCATGACCCGGCCGCTGCCCTCCGAGTTCCTGATCTTGATCAGCTCATGGAGGCTGAAAGGCATTGTGGAGAGCGGTTTAGCCATGAAGAGTGCATGCTGGCTTTGACAGAGAGACTCATATGTTTATTTGTCCTTATCAGTTGGGGTTGGTCTTTTTAAACCTAATTTGCAGGGAGACCCCCGTCTCATAAGGAACTCCAGGCCACCTGTGAagaatacagtaatacaataacGAAGACATGCATTGCTGtccatatttaataatactattCTGTGCTCCAGCTGTCCTGCTCCGcttattttcttctatttctAAAGACAGATTTGTAATTACTTTAAAGGAACGGAGTACTTCTGTGAGGCCTGGAAAATAAAAGACTAAACAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018026 True 2116 mRNA 0.58 7 32841023 32845300

Neighbor

gene id symbol gene type direction distance location
AMCG00018017 NA coding upstream 188339 32607413 ~ 32652684 (+)
AMCG00018018 NA coding upstream 239529 32594172 ~ 32601494 (+)
AMCG00018019 NA coding upstream 248119 32590175 ~ 32592904 (+)
AMCG00018011 NA coding upstream 380266 32442543 ~ 32460757 (+)
AMCG00018013 NA coding upstream 402017 32429234 ~ 32439006 (+)
AMCG00018033 NA coding downstream 68021 32913321 ~ 32914729 (+)
AMCG00018034 NA coding downstream 101568 32946868 ~ 32947806 (+)
AMCG00018030 LOC106609072 coding downstream 130631 32975931 ~ 33015403 (+)
G94906 NA non-coding upstream 43525 32794755 ~ 32797498 (+)
G94899 NA non-coding upstream 78440 32746824 ~ 32762583 (+)
G94858 NA non-coding upstream 305123 32517123 ~ 32535900 (+)
G94792 NA non-coding upstream 490660 32347462 ~ 32350363 (+)
G94763 slc1a1,LOC107691854,LOC107561518 non-coding upstream 603832 32233771 ~ 32237191 (+)
AMCG00018027 NA other upstream 47419 32789441 ~ 32793604 (+)
G94857 LOC106577504,LOC103385245,LOC108267515 other upstream 239574 32507690 ~ 32601449 (+)
G94838 clcn3,LOC106577864 other upstream 374387 32461298 ~ 32466636 (+)
AMCG00018012 NA other upstream 415788 32407429 ~ 32425235 (+)
AMCG00017978 NA other upstream 2009156 30819869 ~ 30831867 (+)

Expression


Co-expression Network