G91151


Basic Information

Item Value
gene id G91151
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 8838647 ~ 8841038 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU113726
GCATTTTTGCAACTAAATGTAGGGGAATGTCTGTTTTTATGTCCTGTTCTGTAGCAGCATTAATGTGAACATTTACTGCACTACATAGATATGAATTAGGCATCTACAAGAGGGAGACGCATCAAAGCAATGAGCTCACAATGGACGTCagcaaacacaaaagaaaatctgaatAATTTATCTTCTTGGACCgggtttaaaatcaaattaacatcTTGCAACACAATATTTATCTTCTTCATGAGTGTATAGATAAAGTCAATATTAACAAtcttaatgattaaatacactACACTTAAATTTAACTCAACAGAACTTGGGGGAGATTTAGCAAAGATTTGTACAGCAAAGCAcatcatattaaaaaacaaactaacgaATGAGTCCATGATGGCAGTTTGTAATAAAGACAGGATGATACATGGGTAGAATGAATTCTGTGTAAACACCTACTTTTGGGATGAACAAATGTTAATGATATACCAAATTGTTGTGACGAATAAGTGCAAGGTCTTTAAAGTAAATTGATTGACATTTATAAAGTGgtcatgattttaaatgtacaggaTATTCCAAGATGCAACATTCTCAACCCATATTGCTCAAGTTCAATTAAAGCCACAGCCGTATGATACAAACAATCACTTAAAATGCTCTGGCGATCATAGGCAATCAAATacgcaatacaaaataaaatatagattcaCCTTTATCCCAGATTAGCTACAATTACTATACAGACTCTTTGAACTGCAAGACAGAAACAATTGTCCTgaacagatctttttttttttttattattgttaagcagaaaacatttagaaacaGTCATCTATGAAAGCACTTTGgatttaaagttgtatttaggACAATGTTTACAAAGAAATACTCAGCTGAcacttcattacattttaaatgttataaagcAGTGTAAATTCAGTCTGTGTTTGATCCATTTTAGTCATTGTCCCATTTAGTCCTGAGTATGTTTAGATTCCTATTAGAGAGTCTAAAGTAGTTTTGCAATCTAATAATCTCAAATGATGATCGTTTAAGCTCCCCatctatttttataattttgttgttgatgttgatttAATGTGGTAACCTGATCAAAATGTCGAGTTAAACAGACACCAAACACACCCTGTTGTTTGTCAAGTTGACAGAAGAGAGACAGTGACTAAAACTGAACAAAAGCTGACTTCATTAACATTTATGAAGTGCAAAGTATACAGAATTCAATGGGAGCATTTAGAATACAACATGTATTGATCCTGTGCTGTCTTCCATGTCTGGAGCAGTTCAAATCTATCACAGATTGGTGTTGCATGATCATTATTTTAGCTGTAATAATTCCTTTTCTTCAGCAGATCTGTCTCATTCTTCCCAGGTATCCccatatatgtttttctttaCTTCTGTTTTAGGAGCTCTTTCCGGGGATGGTTTCATAAGCGTCTCGGCTTTCTGAGTCATCGTGACTTCGTAGTTCTCCCGGTTTTTACTGCGTAGCTGCTCGTACATGATCGATTTCTTTTTAGGCTTCTCTTCGTCCAAGTACACTAGCGGAGCTTGTGTACCAAGTTCCTCCACCCCCGAGGGCGCAGACTCACTCATGGTTGAGCTGAATGGGGGGGGCTCGTATGACGACTCTGGAAGTGAGGAACTGAAATCGGGAGAGTAGGAGTCGGCCGGGCTGTGGGAACTCTGGGGGAGGGTGTACTCTGACTCCAACTCCATTCGGGTCTCCTCTGCCTGGTTTGGTCTCTGAGCTCTAAATTGGACACGACAACACATGA

Function

GO:

id name namespace
GO:1902600 proton transmembrane transport biological_process
GO:0008137 NADH dehydrogenase (ubiquinone) activity molecular_function
GO:0009055 electron transfer activity molecular_function
GO:0003954 NADH dehydrogenase activity molecular_function
GO:0022857 transmembrane transporter activity molecular_function
GO:0016491 oxidoreductase activity molecular_function
GO:0050136 NADH dehydrogenase (quinone) activity molecular_function
GO:0022890 inorganic cation transmembrane transporter activity molecular_function
GO:0015002 heme-copper terminal oxidase activity molecular_function
GO:0015318 inorganic molecular entity transmembrane transporter activity molecular_function
GO:0005215 transporter activity molecular_function
GO:0015075 ion transmembrane transporter activity molecular_function
GO:0015077 monovalent inorganic cation transmembrane transporter activity molecular_function
GO:0015078 proton transmembrane transporter activity molecular_function
GO:0008324 cation transmembrane transporter activity molecular_function
GO:0003824 catalytic activity molecular_function
GO:0016651 oxidoreductase activity, acting on NAD(P)H molecular_function
GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor molecular_function
GO:0004129 cytochrome-c oxidase activity molecular_function
GO:0016675 oxidoreductase activity, acting on a heme group of donors molecular_function
GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor molecular_function

KEGG:

id description
ko00190 Oxidative phosphorylation
ko04260 Cardiac muscle contraction
ko04723 Retrograde endocannabinoid signaling
ko04714 Thermogenesis
ko05010 Alzheimer disease
ko05012 Parkinson disease
ko05016 Huntington disease
ko04932 Non-alcoholic fatty liver disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU113726 True 1802 lncRNA 0.37 3 8838647 8841038

Neighbor

gene id symbol gene type direction distance location
AMCG00017534 NA coding upstream 29653 8807015 ~ 8808994 (+)
AMCG00017533 sgcb,LOC107597442,LOC106584109 coding upstream 32179 8799335 ~ 8806468 (+)
AMCG00017523 NA coding upstream 184305 8647446 ~ 8654342 (+)
AMCG00017521 NA coding upstream 236992 8591169 ~ 8601655 (+)
AMCG00017522 exoc1,LOC106560275 coding upstream 251976 8567667 ~ 8586671 (+)
AMCG00017538 fryl coding downstream 28076 8869114 ~ 8969478 (+)
AMCG00017543 NA coding downstream 176841 9017879 ~ 9021042 (+)
AMCG00017544 NA coding downstream 245539 9086577 ~ 9103203 (+)
AMCG00017545 NA coding downstream 286725 9127763 ~ 9147339 (+)
AMCG00017551 NA coding downstream 416168 9257206 ~ 9372195 (+)
G91135 NA non-coding upstream 13810 8819713 ~ 8824837 (+)
G91128 NA non-coding upstream 54558 8783867 ~ 8784089 (+)
G91104 NA non-coding upstream 106015 8732368 ~ 8732632 (+)
G91004 NA non-coding upstream 551919 8286292 ~ 8286728 (+)
G90991 NA non-coding upstream 609071 8229315 ~ 8229576 (+)
G91307 NA non-coding downstream 1325492 10166530 ~ 10166747 (+)
G91310 NA non-coding downstream 1456364 10297402 ~ 10297808 (+)
G91329 NA non-coding downstream 1727140 10568178 ~ 10568428 (+)
G91334 NA non-coding downstream 1899065 10740103 ~ 10764336 (+)
G91339 NA non-coding downstream 1948560 10789598 ~ 10789889 (+)
AMCG00017527 tkfc,LOC107731922,LOC107095500 other upstream 73744 8751713 ~ 8764903 (+)
AMCG00017526 paics,LOC107555752 other upstream 137893 8687697 ~ 8700754 (+)
G90955 NA other upstream 705793 8132368 ~ 8132854 (+)
AMCG00017508 NA other upstream 1025008 7806378 ~ 7813639 (+)
G90881 NA other upstream 1145300 7692585 ~ 7693347 (+)
G91281 LOC103376870 other downstream 678735 9519773 ~ 9583280 (+)
G91452 cc2d2a other downstream 3038576 11879614 ~ 11880499 (+)
AMCG00017600 NA other downstream 4355857 13196895 ~ 13259760 (+)
AMCG00017615 sorcs2,LOC106577493,LOC107590992,LOC107656200,LOC107722411 other downstream 4940228 13781266 ~ 13830819 (+)
AMCG00017620 htra3,LOC106577909 other downstream 5184598 14025636 ~ 14039063 (+)

Expression


Co-expression Network