Gene
RNA
| Item | Value |
|---|---|
| gene id | G92145 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030131.1 |
| NCBI id | CM030131.1 |
| chromosome length | 33043351 |
| location | 16315054 ~ 16315523 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU114933 | True | 470 | lncRNA | 0.39 | 1 | 16315054 | 16315523 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017656 | NA | coding | upstream | 480004 | 15828929 ~ 15835050 (+) |
| AMCG00017658 | NA | coding | upstream | 520607 | 15609983 ~ 15794447 (+) |
| AMCG00017657 | slc7a11,LOC107740166,LOC107593222,LOC107680987 | coding | upstream | 709944 | 15599419 ~ 15605110 (+) |
| AMCG00017654 | NA | coding | upstream | 1102795 | 15207609 ~ 15212259 (+) |
| AMCG00017655 | NA | coding | upstream | 1120890 | 15193702 ~ 15194164 (+) |
| AMCG00017662 | NA | coding | downstream | 1080208 | 17395731 ~ 17428335 (+) |
| AMCG00017666 | pgrmc2 | coding | downstream | 1193728 | 17509251 ~ 17511291 (+) |
| AMCG00017667 | mfsd8 | coding | downstream | 1262532 | 17578055 ~ 17585825 (+) |
| AMCG00017673 | NA | coding | downstream | 1361086 | 17676609 ~ 17692389 (+) |
| AMCG00017679 | reep1,LOC107719410,LOC107731967,LOC107703485,LOC107561684 | coding | downstream | 1439002 | 17754525 ~ 17782183 (+) |
| G92133 | NA | non-coding | upstream | 132984 | 16166642 ~ 16182070 (+) |
| G92095 | NA | non-coding | upstream | 787176 | 15527561 ~ 15527878 (+) |
| G92059 | NA | non-coding | upstream | 1152362 | 15162330 ~ 15162692 (+) |
| G92038 | NA | non-coding | upstream | 1229656 | 15062297 ~ 15085398 (+) |
| G92039 | LOC107556532,LOC102237872,LOC107674234,LOC107737080 | non-coding | upstream | 1247236 | 15066137 ~ 15067818 (+) |
| G92147 | LOC102215562 | non-coding | downstream | 114929 | 16430452 ~ 16430712 (+) |
| G92151 | NA | non-coding | downstream | 288128 | 16603651 ~ 16603919 (+) |
| G92152 | NA | non-coding | downstream | 348343 | 16663866 ~ 16664235 (+) |
| G92169 | NA | non-coding | downstream | 525930 | 16841453 ~ 16909914 (+) |
| G92178 | NA | non-coding | downstream | 681695 | 16997218 ~ 16997459 (+) |
| G92130 | LOC101154678 | other | upstream | 179738 | 16135025 ~ 16135316 (+) |
| G92123 | LOC101154678 | other | upstream | 447420 | 15867031 ~ 15867634 (+) |
| AMCG00017650 | NA | other | upstream | 1199023 | 15109422 ~ 15116031 (+) |
| AMCG00017652 | NA | other | upstream | 1208219 | 15093191 ~ 15106835 (+) |
| AMCG00017651 | NA | other | upstream | 1224225 | 15088132 ~ 15090829 (+) |
| AMCG00017668 | NA | other | downstream | 1286012 | 17601535 ~ 17620033 (+) |
| AMCG00017674 | rnf103,LOC107722440 | other | downstream | 1383400 | 17698923 ~ 17723950 (+) |
| G92538 | NA | other | downstream | 2757715 | 19073238 ~ 19073662 (+) |
| AMCG00017710 | nans,LOC108241509,LOC103384124,LOC107390934,LOC107390917 | other | downstream | 3080505 | 19396028 ~ 19433103 (+) |
| AMCG00017712 | NA | other | downstream | 3128649 | 19444172 ~ 19528293 (+) |
