G93399


Basic Information

Item Value
gene id G93399
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 24301420 ~ 24301980 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU116522
CTTACTTAAAAATTTCCTTCTTTTCCAAAGAAAATCATTTagttttgtccattaaaataacatcaaattgatcagaaatacactgtagacattgttaatgttgtaaatgactattgtagctggaaatggctgatttgtaatggaatatctacataggcgtacagaggcccattatcagcaaccatcagtcctgtgttctaatggcacgttgtgtttgctaatcaagtttataattttaaaaggttaATTGATCATTTGAAAACCCTTtagcaattatgttagcacagctgaaaactgttgtgctgattaaagaagcaataaaactggccttctttagactagttgagtatctggagcaccagcaattgtgggttcgattacaggctcaaaatggccagaaacaaataactcttctgaaactcatcagtctattcttgttctgagaaatgaaggctattccatgcgagaaattgccaagaaactgaagatctcgtacaacgctgtgtactactcagcacaaactggctctaaccagaatagaaagaggagtgggaggccccg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116522 True 561 lncRNA 0.37 1 24301420 24301980

Neighbor

gene id symbol gene type direction distance location
AMCG00017818 limch1 coding downstream 48336 24119477 ~ 24253084 (-)
AMCG00017815 tmem33,LOC107741195 coding downstream 247488 24048822 ~ 24053932 (-)
AMCG00017812 NA coding downstream 407475 23885184 ~ 23893945 (-)
AMCG00017811 NA coding downstream 416966 23875123 ~ 23884454 (-)
AMCG00017804 NA coding downstream 437764 23857838 ~ 23863656 (-)
AMCG00017824 NA coding upstream 138556 24440536 ~ 24568029 (-)
AMCG00017827 LOC107660492,LOC107757584,LOC107700259 coding upstream 289037 24591017 ~ 24596789 (-)
AMCG00017828 rhoh coding upstream 309449 24611429 ~ 24612007 (-)
AMCG00017826 NA coding upstream 326391 24628371 ~ 24649998 (-)
AMCG00017834 ube2kb,ube2k,LOC107088242,LOC108261162,LOC100708886,LOC105026169,LOC102229303 coding upstream 383323 24685303 ~ 24701049 (-)
G93355 NA non-coding downstream 255051 24044194 ~ 24046369 (-)
G93350 NA non-coding downstream 263810 24034696 ~ 24037610 (-)
G93324 NA non-coding downstream 390741 23907575 ~ 23910679 (-)
G93173 NA non-coding downstream 761300 23444211 ~ 23540120 (-)
G93165 NA non-coding downstream 971676 23326525 ~ 23329744 (-)
G93434 NA non-coding upstream 203402 24505382 ~ 24505610 (-)
G93500 NA non-coding upstream 375185 24677165 ~ 24679900 (-)
G93509 rl9,rpl9,LOC107562595,LOC107700291 non-coding upstream 423958 24725938 ~ 24730222 (-)
G93576 NA non-coding upstream 620487 24922467 ~ 24927188 (-)
G93591 NA non-coding upstream 647988 24949968 ~ 24950248 (-)
AMCG00017819 NA other downstream 30825 24264679 ~ 24270595 (-)
AMCG00017780 LOC101079287,LOC106577738,LOC100690429,LOC105925506,LOC108244244 other downstream 979466 23318093 ~ 23321954 (-)
AMCG00017725 NA other downstream 3942795 20302000 ~ 20358625 (-)
G92591 nansa,LOC108416893,LOC108416857,LOC107723182 other downstream 4882064 19412987 ~ 19419356 (-)
G92436 NA other downstream 5838244 18462784 ~ 18463176 (-)
AMCG00017839 NA other upstream 644115 24946095 ~ 24949136 (-)
AMCG00017844 frmpd1b,frmpd1,LOC107750435,LOC107570223,LOC107655878 other upstream 695564 24997544 ~ 25018212 (-)
AMCG00017861 LOC103354863 other upstream 1643161 25945141 ~ 25957648 (-)
AMCG00017866 smim19,LOC107754471,LOC106604684,LOC106611785 other upstream 1710508 26012488 ~ 26015942 (-)
G93795 shisa3,LOC102786300 other upstream 1802046 26104026 ~ 26107805 (-)

Expression


Co-expression Network