G93434


Basic Information

Item Value
gene id G93434
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 24505382 ~ 24505610 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU116575
ctccctgcccccctggtccctagtttaaatgattctcaatttctctgcccatatgctctcccaatgcattagccccccttctgtttagatgtagaccgtccggtttgtacaggtcccatctatcccagaagaaagaccaatgctccataaacctaaacccctcttccctacaccaagatttcaaccacgtgttaaactttctaatctctgcctgtctccctggcctggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116575 True 229 lncRNA 0.49 1 24505382 24505610

Neighbor

gene id symbol gene type direction distance location
AMCG00017818 limch1 coding downstream 252298 24119477 ~ 24253084 (-)
AMCG00017815 tmem33,LOC107741195 coding downstream 451450 24048822 ~ 24053932 (-)
AMCG00017812 NA coding downstream 611437 23885184 ~ 23893945 (-)
AMCG00017811 NA coding downstream 620928 23875123 ~ 23884454 (-)
AMCG00017804 NA coding downstream 641726 23857838 ~ 23863656 (-)
AMCG00017827 LOC107660492,LOC107757584,LOC107700259 coding upstream 85407 24591017 ~ 24596789 (-)
AMCG00017828 rhoh coding upstream 105819 24611429 ~ 24612007 (-)
AMCG00017826 NA coding upstream 122761 24628371 ~ 24649998 (-)
AMCG00017834 ube2kb,ube2k,LOC107088242,LOC108261162,LOC100708886,LOC105026169,LOC102229303 coding upstream 179693 24685303 ~ 24701049 (-)
AMCG00017833 lias,LOC102787141 coding upstream 210840 24716450 ~ 24725692 (-)
G93399 NA non-coding downstream 203402 24301420 ~ 24301980 (-)
G93355 NA non-coding downstream 459013 24044194 ~ 24046369 (-)
G93350 NA non-coding downstream 467772 24034696 ~ 24037610 (-)
G93324 NA non-coding downstream 594703 23907575 ~ 23910679 (-)
G93173 NA non-coding downstream 965262 23444211 ~ 23540120 (-)
G93500 NA non-coding upstream 171555 24677165 ~ 24679900 (-)
G93509 rl9,rpl9,LOC107562595,LOC107700291 non-coding upstream 220328 24725938 ~ 24730222 (-)
G93576 NA non-coding upstream 416857 24922467 ~ 24927188 (-)
G93591 NA non-coding upstream 444358 24949968 ~ 24950248 (-)
G93639 NA non-coding upstream 601192 25106802 ~ 25107082 (-)
AMCG00017819 NA other downstream 234787 24264679 ~ 24270595 (-)
AMCG00017780 LOC101079287,LOC106577738,LOC100690429,LOC105925506,LOC108244244 other downstream 1183428 23318093 ~ 23321954 (-)
AMCG00017725 NA other downstream 4146757 20302000 ~ 20358625 (-)
G92591 nansa,LOC108416893,LOC108416857,LOC107723182 other downstream 5086026 19412987 ~ 19419356 (-)
G92436 NA other downstream 6042206 18462784 ~ 18463176 (-)
AMCG00017839 NA other upstream 440485 24946095 ~ 24949136 (-)
AMCG00017844 frmpd1b,frmpd1,LOC107750435,LOC107570223,LOC107655878 other upstream 491934 24997544 ~ 25018212 (-)
AMCG00017861 LOC103354863 other upstream 1439531 25945141 ~ 25957648 (-)
AMCG00017866 smim19,LOC107754471,LOC106604684,LOC106611785 other upstream 1506878 26012488 ~ 26015942 (-)
G93795 shisa3,LOC102786300 other upstream 1598416 26104026 ~ 26107805 (-)

Expression


Co-expression Network