G94172


Basic Information

Item Value
gene id G94172
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 28874161 ~ 28875923 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU117465
CTCCAGTGCTCGCCGCTACTTTGTCTATGTTTTTTTACACCGATAATAACGCATTTGTAACTCAGTCCACTTCGGATGTCACAGGTGGCTGTCAATCATCTCCCCTCCGAGTGCAGAGATCAATCGGACCGCGCCGCCGGGAGCTACAGAGTATCCATCCCGCCGCGCCGCGCCTGCGCCGTGCCGCCGCCGCCACTCACCCAGCTCTGCGCGGCGTTGCTGAGCTTGGCTTTCTTGTGCGAGCCCCCGGGGGTGTCCATGTCGCTGCCGCTCACCGGGCCCGACGCGCCGACTCCGAGCTGATGAAGGCGGTGTACGTGCAGGCTCGACCGCCGGGGCTTTCGCCACAACCCGGTACCGACGCGGAGCGAGAGGCTGGAGCGGAAGCGCAGGCGCAGCGCTGCCGGAAGTGACGTCTGCGGCCTTGGAATTGGCGGTCGCCTTGACAACCGGCATGCGCAAGATGCCGTAAATCGCGTCGCGCTGCAGCAGAGCGGGCCGCCCGCGGGACAGGCCGGGCGCTGGTACGGGCCGGGTGGGGACCCGTCTCGGCCAGGGCCCCTACGAGTGCGCCTTCATACTAACCACAGAGACAGCGGCCCCTGATTCACTGCGCGGTTCATCCCCAGCCGCGCTGATTCCGCCGTAACGGACGATGCAGAGCATCCCAACAGCTGTAATCTCACGGATCCTGCCGGGGCTGCtcgtggtgtggtgtggtgggA

Function

NR:

description
PREDICTED: adhesive plaque matrix protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117465 True 725 TUCP 0.66 2 28874161 28875923

Neighbor

gene id symbol gene type direction distance location
AMCG00017918 NA coding downstream 22009 28846378 ~ 28852152 (-)
AMCG00017917 tbck,LOC102796740 coding downstream 32525 28814981 ~ 28841636 (-)
AMCG00017916 NA coding downstream 175642 28694548 ~ 28698519 (-)
AMCG00017911 NA coding downstream 209466 28649941 ~ 28664695 (-)
AMCG00017909 cxxc4,LOC103148507,LOC106610359 coding downstream 304506 28568960 ~ 28569655 (-)
AMCG00017924 aimp1,LOC107684278,LOC107675933,LOC107729369 coding upstream 155956 29031879 ~ 29049397 (-)
AMCG00017925 lef1 coding upstream 203086 29079009 ~ 29091940 (-)
AMCG00017926 lef1,LOC103361279 coding upstream 224585 29100508 ~ 29117642 (-)
AMCG00017928 LOC100135902,LOC106610344 coding upstream 382582 29258505 ~ 29263533 (-)
AMCG00017929 LOC104953273 coding upstream 393358 29269281 ~ 29272932 (-)
G94137 NA non-coding downstream 138417 28733824 ~ 28735744 (-)
G94074 NA non-coding downstream 448918 28425032 ~ 28425243 (-)
G94073 NA non-coding downstream 453899 28419916 ~ 28420262 (-)
G94060 NA non-coding downstream 777003 28093468 ~ 28097158 (-)
G94012 NA non-coding downstream 1090111 27779037 ~ 27784050 (-)
G94218 NA non-coding upstream 331547 29207470 ~ 29207804 (-)
G94246 NA non-coding upstream 410284 29286207 ~ 29286747 (-)
G94337 NA non-coding upstream 1036059 29911982 ~ 29914837 (-)
G94358 NA non-coding upstream 1120326 29996249 ~ 29997513 (-)
G94359 NA non-coding upstream 1122431 29998354 ~ 30002282 (-)
AMCG00017906 elavl2 other downstream 729572 28098905 ~ 28144589 (-)
AMCG00017902 NA other downstream 1034371 27838251 ~ 27839790 (-)
G93796 NA other downstream 2764087 26109060 ~ 26110074 (-)
G93795 shisa3,LOC102786300 other downstream 2766356 26104026 ~ 26107805 (-)
AMCG00017866 smim19,LOC107754471,LOC106604684,LOC106611785 other downstream 2858219 26012488 ~ 26015942 (-)
G94238 pla2g12a,LOC108263807,LOC102792247 other upstream 393312 29269235 ~ 29273168 (-)
AMCG00017972 dcaf10 other upstream 1709806 30585729 ~ 30596417 (-)
G94543 NA other upstream 1752065 30627988 ~ 30658493 (-)
AMCG00018000 slc1a1 other upstream 3383784 32259707 ~ 32263865 (-)
AMCG00018004 NA other upstream 3395771 32271694 ~ 32276372 (-)

Expression


Co-expression Network