G94543


Basic Information

Item Value
gene id G94543
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 30627988 ~ 30658493 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU117930
TCAGCTCTCatccaaaaacaattaaatctgTATTAACACAGCATAAacctttatataaaaataataataataataataataataataataataataataataataataataataataataaagaggaTGTGGTTTGCTTATATTGCCCCGGTTTTATTTAACGCATTCTTCCCTGTTGCCAGACCCAATGACTCCTAAATGGTGTGCTACCGATTAAATACAGTGTCATCATGTGCTGTATCTTAACTAGACAACGAAACATATTAGTACATTTCTGTGCAAATGGGATACAGTTACTTGACAACAACAGGCAGGTAAGAAGGCTCCAGGTTGATGGTGTCCACCGTCCGCACGGTGAGCGCAGGCACACTTTATTAAAGGTCCGGTTACACTTCCTACCCCTGCAAACACCTGGGAGGGACATTGAACAAGTAAAGTGCAAATACATTCGTATAGAAATATCAATAGGATCGAGATTTCCTAAATTGCTCAGTTCATTCAttgcacatttgaaaaatacCTATACACGTTAGAAAAGCgcacaaaataattgtaaaatgatACAACACCCTCTTGGATCTCGTTTACTTTTCCCAGCAATTTGTAAATTAGGCTACTATCGACAAGGAACCAATAATCAACTGTTGGAAACGTGATGAGTCTAAATTAAGGTTGAATGTGTGTAATATGTCTTCAGTAATGCAGTATCTCCAAGGAAAGTAACAATATGCTAAAGATTTCTATTATATACACGCAGGTTGGATATGGTCAGGATAAAATGGCTGTTCGGTGATATAATCCAACAGAAGGAAACGTGGATAATTTGCGCAATAATTAAGAGGATATATGTCAGACAATTAGTCCTTGTCAATATGCTGTGCTTCTACTTTATTTACTgtttagatatagatatacattcaATTTTCCATCTATATAAGTGGTTTGCTTTGTCAAGTATTGACATTGTAAACATCTTTGGGGTTAGGTTATTAAATTGattataattgttaaatatttctCTGTTCACCACGCCAATGCTGCGTCCTGCTATCCCCTTTAATACATGCCaacctctttttcttttttctttttttacaaaaatggcATACATGATATAGGAAGGACAATAGTGAATAATTCATGTTAATTTTGATATGGATGTAATTATAGTTTTTCTGTATAATCTGGGGTAGTTACGAAGCTTGTATGTTAAAGGGAGGCAATGTCACAAACCcttcacacattcatattaacaaaataatccGATATGTGAATGTGTACAGCTGTTAATGCGAGACATGTGTAGTTCATTGCCGTACAGTTTTTAACACTGCGATCATGATCTTTAGTGTGACTAGAGCATCCCAATCAAGTTCACCAGCATCACCAGTCTGTTGCTGAGCAGAGGATTTACCTGGCAATACGCGCACCTCTCTGATCCTGAAAGCGACACAAGATCCTGAAGCTCATTGTCCATATTAAAGTGGACACACAGTCCCTGTCGTGGCGGACAACAAATGATTGTCACTGCAGAGGAGAACCTGTTTGCAAACTTTTGCCCCTTTCTTGTTATGTGTTGCTCGCTTCCCGGGGGAAAATGTCCTCGTACGCGGGGGGCAGTTCGTTGGGAAGAGGGTAAGAGAAGGGGTACGAGTGGTTCAGCTCTGGGTCTGTCGGGGAGTAGCCTGGCAGCTCCACCGAGGGATGGCCACCACACTGTACCTCCACGCCCGCCTCGTCCAAAACGTTGAACACCCCCAGGTTGATGTAGGACACCGGTTGAAACTCCCCCCCGGCCGGGTCCTGCTCCTCGCTGAAGAGGATGGCCCCCACGCTTTGCCTCTGGGACAGTCTCCTGCGGTAGAACTGGGCAGATTTATACCTCTTGATGATCACCAGGTTGACCAGCCCCAACAGACACTCCAGGGTGTTGAGGATGGTGGATATGACCAGACTCCTCTGATAATCCTTTAATTGCTCGCAGATGGCGATTAAATCCACCGAGTCCAGGCAGTAGTGGGAATATTTCCTCTCCACCAGGGACACGGTGTCGCCGTCTATCACGGCGCCCGAGAAGGCGGTGAGGACCCCCAGCATGAACACCAAGACCCCCAGGAGGAAGAAATTCTGGCTCCCCGGCTTGGCTTGGCAGCACAGCAGGGCAATCCCCAGTAGCGTTTGCCCCAGACAGACCAGCACCCCGGAGTAAAAAGCCCCGGCCGCCGTCCCCAGGTGGAAATGCACTTTTACTTCGGTGCCCTGCAAGAAGCATTGGATCCCGACGGCGACGGCGCACAGGGCGCAGACGAAGAGCAGGCTGCTGGACACGATGGCACACAGTCCTTTCCCACTCAACTTCATTATATCCCTCCTCTACCTCTCCCGGTCCCCGTCCCTCCTTCTTCATCCTCCTTTGTCCTCCTCGTCAGCCCGTCTCGGAGAGCTGTCAGACGGTGACATGATCCGCCGATGATTGCTCTTCAAAAGCAGGATCTCCGGAGCTGCGcgctctctccccctttcccgCTGCTTCCAACATGGATTAATTATTGATGGGAAGAGCCGGCTCCTTCTGCAGACAGGACTCCAGAAATCAGACCTAAAGTTAACCCTGGAGCGCGCTCTCTCTTCATGCTAGGACCAGAAGGCACTTTGGTCTGAAATGTTCCCATCCCGGCTCAAAGCGTGTTAATGAGGATATTCCTTCCTTGAAGCCAGCCTAGATGAAGCTAATTAAAGGCAGAGCGCGGATCGCTTGTTCTGTCCCCCGCAGTGATTACTGACCTCCAGCGCCTTGTTTAAGATCTCCTCCTGGTCCTTGCAGGCGTTCTCCATCATGTCTTCATACAGGTCCACGAGGAAGGCGATGAGATAGGGTGAGCTGTGCGTCTTCTGGAGCTCCAGGACCTGCTCAAGCAAGCCGGGGAACGTCGAGAGGCCTCGGTCCTGCAA

Function

GO:

id name namespace
GO:0005540 hyaluronic acid binding molecular_function
GO:0031406 carboxylic acid binding molecular_function
GO:0043177 organic acid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117930 True 2952 TUCP 0.46 2 30627988 30658493

Neighbor

gene id symbol gene type direction distance location
AMCG00017971 NA coding downstream 20860 30605513 ~ 30607128 (-)
AMCG00017965 LOC107749781 coding downstream 46992 30538968 ~ 30580996 (-)
AMCG00017966 nfkb1 coding downstream 113793 30491226 ~ 30514195 (-)
AMCG00017967 NA coding downstream 137160 30489476 ~ 30490828 (-)
AMCG00017963 cisd2,LOC106602754 coding downstream 188379 30432203 ~ 30439609 (-)
AMCG00017977 NA coding upstream 133 30658626 ~ 30722050 (-)
AMCG00017976 pigg coding upstream 86478 30744971 ~ 30776441 (-)
AMCG00017974 pigg coding upstream 151911 30810404 ~ 30811335 (-)
AMCG00017975 clg15h9orf72,LOC103354026 coding upstream 174300 30832793 ~ 30848229 (-)
AMCG00017979 NA coding upstream 322557 30981050 ~ 30982903 (-)
G94533 NA non-coding downstream 13669 30610821 ~ 30614319 (-)
G94483 NA non-coding downstream 166815 30456198 ~ 30461173 (-)
G94482 NA non-coding downstream 167100 30459549 ~ 30460888 (-)
G94392 NA non-coding downstream 518806 30108971 ~ 30109182 (-)
G94359 NA non-coding downstream 625706 29998354 ~ 30002282 (-)
G94563 NA non-coding upstream 59859 30718352 ~ 30721502 (-)
G94577 NA non-coding upstream 321402 30979895 ~ 30980552 (-)
G94590 NA non-coding upstream 720762 31379255 ~ 31380225 (-)
G94598 NA non-coding upstream 799386 31457879 ~ 31458254 (-)
G94600 NA non-coding upstream 858339 31516832 ~ 31517036 (-)
AMCG00017972 dcaf10 other downstream 31571 30585729 ~ 30596417 (-)
G94238 pla2g12a,LOC108263807,LOC102792247 other downstream 1354820 29269235 ~ 29273168 (-)
G94172 NA other downstream 1752065 28874161 ~ 28875923 (-)
AMCG00017906 elavl2 other downstream 2483399 28098905 ~ 28144589 (-)
AMCG00017902 NA other downstream 2788198 27838251 ~ 27839790 (-)
AMCG00018000 slc1a1 other upstream 1601214 32259707 ~ 32263865 (-)
AMCG00018004 NA other upstream 1613201 32271694 ~ 32276372 (-)
AMCG00018007 NA other upstream 1626992 32285485 ~ 32308080 (-)
G94835 NA other upstream 1796592 32455085 ~ 32456410 (-)
AMCG00018021 ank2,LOC106577504,LOC106608576 other upstream 1942696 32601189 ~ 32605751 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G194555 NA non-coding CI01000046 null 33289 ~ 36616 (+)