G94613


Basic Information

Item Value
gene id G94613
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 31628605 ~ 31629313 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU118014
TGGACagattctttctttttctttattttgtctggCAGACATCTGGGCATACATTTTGGCATCGATTCCACACGAGGAGGACTCCTGTCATGCATGCAAAGCCATCTCACAGTCACTACCGATCAATCAGATGGAAACATGAAGGAACTTCTGTGAGATTCTTCTTCCGTTTCTTACATGTTCAAAACGGTTCGAATGCTTCCCATTGGTCATGAGATCGAAAGCCTCATTCACTCTGTCCAAGGGCATTGTGTGGGTCACAAACTCATCCAGCATGATCTTCTTTTGCATGTAGTCGTTCACCAGCTTGGGCACACTGTCCACACCCTTCCAGCCTGGGCCAAAAAGAAATATTTGTCTGCCCTAGAAAGTCCTTTCCTCAAGCTGTGTTTTGAAGTCCAAGAAGAAACAGAGAACACAGGCGAGC

Function

NR:

description
uncharacterized histidine-rich protein DDB_G0274557-like

GO:

id name namespace
GO:0030168 platelet activation biological_process
GO:0007596 blood coagulation biological_process
GO:0050817 coagulation biological_process

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
TU118014 True 427 lncRNA 0.45 2 31628605 31629313

Neighbor

gene id symbol gene type direction distance location
AMCG00017980 ampm1,metap1,LOC107556924,LOC107733733,LOC106600494,LOC107695030 coding upstream 7499 31609218 ~ 31621106 (+)
AMCG00017973 NA coding upstream 971681 30656133 ~ 30656924 (+)
AMCG00017968 LOC106604549 coding upstream 997370 30620823 ~ 30631235 (+)
AMCG00017969 NA coding upstream 1014271 30611050 ~ 30614334 (+)
AMCG00017970 NA coding upstream 1024362 30596996 ~ 30604243 (+)
AMCG00017982 NA coding downstream 16512 31645825 ~ 31649592 (+)
AMCG00017981 NA coding downstream 30588 31659901 ~ 31675037 (+)
AMCG00017985 NA coding downstream 111255 31740568 ~ 31745981 (+)
AMCG00017989 NA coding downstream 485848 32115161 ~ 32123373 (+)
AMCG00017996 NA coding downstream 552389 32181702 ~ 32186561 (+)
G94609 NA non-coding upstream 5062 31622456 ~ 31623543 (+)
G94601 eif4e,if4ea,LOC103354029,LOC107085786,LOC107730661,LOC105908755,LOC107696296 non-coding upstream 25493 31599760 ~ 31603112 (+)
G94599 NA non-coding upstream 111576 31516828 ~ 31517029 (+)
G94594 NA non-coding upstream 210485 31417849 ~ 31418120 (+)
G94591 NA non-coding upstream 233239 31395146 ~ 31395366 (+)
G94664 NA non-coding downstream 138323 31767636 ~ 31767848 (+)
G94668 NA non-coding downstream 230681 31859994 ~ 31864202 (+)
G94681 NA non-coding downstream 269189 31898502 ~ 31899680 (+)
G94713 NA non-coding downstream 462107 32091420 ~ 32093044 (+)
G94739 NA non-coding downstream 535506 32164819 ~ 32165297 (+)
AMCG00017978 NA other upstream 796738 30819869 ~ 30831867 (+)
G94275 NA other upstream 2178258 29433412 ~ 29450347 (+)
AMCG00017910 NA other upstream 2981855 28631892 ~ 28646750 (+)
AMCG00017898 kcnip4,LOC103360335,LOC100711851,LOC102780455 other upstream 3931226 27472881 ~ 27697379 (+)
AMCG00017886 NA other upstream 4631153 26992891 ~ 26997452 (+)
AMCG00018012 NA other downstream 778116 32407429 ~ 32425235 (+)
G94838 clcn3,LOC106577864 other downstream 831985 32461298 ~ 32466636 (+)
G94857 LOC106577504,LOC103385245,LOC108267515 other downstream 878377 32507690 ~ 32601449 (+)
AMCG00018027 NA other downstream 1160128 32789441 ~ 32793604 (+)

Expression


Co-expression Network