G94906


Basic Information

Item Value
gene id G94906
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 32794755 ~ 32797498 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU118400
cacattattttACTGTCTTTTACCAGCAGCTTGTATATCATTCTCAGCATTTGTACAGGTGTCATAAGCAGAAACTACAAACGCAAGGCGATACAGAGACGTTATCTGCATGTCCACACACCCCGTCTTCAAAGTCCTGTCACTAACTGCAGAGCGCAACCTTCCACCGCACAGTTCAAAGATACATTGGTCTAAATGCCTAGCCATCCCATAATAACAGACTCAAACACAGTGACGATACACAACGCAGTACAATGGCCTCATTGGTCTATAAAAGTGCTGCCTAGTTTGAAAAAAGTGAAGTATTACAGGTAGTCACAGTACGTTCTATAAATTCCTTGTTTAGAAATTTCTACTTATTCTGCAAGATGTAAATATTTAGGAACTGCCTACTATTGGTCACTAAAGTTCACTAAAGGTCACTTTAATGTATCCTGTGGTGACATCTGTGAGTGGAGTCACTCGCCAGAAAGAGCAAGGGGACGTCCTCCTGCACGCATTACTTGCTTTCACAATTGCTTCATAGCTAATCAATTGCTTTACAGTAGTGATCACATCAGATGCATTACAGAAGCCCCTAAAGTCAACCATCACCAACATGAAAAACGTTTACAAGCAGCTTTCAAATGGGCAACTAGATGTGTTTAAATGTCCTGTGAACACGTATGTTTGCATCAGGAACAGGTTTTGTGTTTCTACATACAATACAAGGTCGGTCGACACTGAGAAACATCGcgttagaaaaagaaaagctacaGTTCCAGCGACTGTGGCATTAACATGTCGCTGAcccacaattaaattaataaatacgtacaaaaataaatatttagtgacGTTAGGATGACATGAAATCCAAAAGAAGGCACTACATGTCTTTTGGACTGTCGCTCGAGTAACTGTTCTCACTGAGGCAGGAGAGTCCTCAGGAAAGGcctgcatttttaatgtgttaGAAGAAAAAAGAACTTCATCCATGAAGGACAaagtaataaatacagtttaaaagcgCACGAGTCCGGGTGATGCTCTGGCTCTGTCCCTCGGGGGTCTCGTGTCCGCAGGGTTAGGAGGCTCCGTTCACCATCTTTTTCTCACCTTGTTCTGCCAGGTGTTTCCAGTTCTGCCGATTCCTCCTGCATCCCTCCAGCAGGGGTGAGCAGGACTCCGACATCCCAGCCAGGgtctgaaacacacagacagaaaacagtcCACACGCTGACACACCGCATCATCGCAGAACGTGACCAGTGGACTGTGGTGTAGACGCACCTCGTACAGCTGGACACAGATGGCGTCGATGAAAGCCACTTGCATGCTGGGAATCTTGTCCCTCTTCTCTCTGTTCATCAGGTCCTGCAGGGGAAGAGACACGGCAGACTCTCAGCACAGGAATAGCAGCAAAATACATTTGGTCCTGCCAATTAAGCAGGATCAGATTGGGTCCCTGTGAGACCAGCACCACTGTTATTTATCTCTGTCTTCTGCATCTCTCAGGGTCCTGCCGGTTAAAGACCAGCTGTCAGACACGTCAATCACTCACGATGGGCTCCACGTTGAGTTCCCGTCTCTCCTTGTCTCCTTGCTCGAAGAACTCAGTGGCAACAAGATCCGCAATCTAGACACGAAAGGAAGAGAAGAAGTCAAACACACTGCCCTTCTAGGCTACAGATCTAGGAATCGTACGTCAGAGTTGTGATATGAATACaccagaacaaaataaaacaacgcTTTTCCAGAgtctttgtttgcacttgctgCCTCTGTTGTGTTAGGAGTGATGCGTTatgctctgttttgtgtttcCACACGCGCTGCACAGCCTCCTCAGTCCAGGAGGTGGACATTGAGAGGAGGTGCttttaaagacagaaaaggTCTTCAAATAGGGTTGTGTGCGTCTGGAACAAGTTACGTCTCCACATTATTGGAGCAGATAGACAGACGCCCCAGAGTTCCTCAAAAACAGCTGGACAACATCTGCGGATAAGCTTGTTATTATCACATAACCAAATAAGTGCCAGGAGGCCTCCACTTGTTTGTAGTGTTTCTTGTGTTTATAAGAGGCAAATGCATGACAGCTACTGCACTGCCTGGGTGTAAACGAGATTCCGCTCAAACCACGGCTGCTGGAAGCAAGGTCTTAATGGACTCTGCACACCCGGCTGCGTACGTCTGACTGGCTCGGGGTGAGAACTGCGTCGGTCACTCTGTGATATCTAACAGTGCTAGGAACGGACCCAAGTCCAGGTCTGTGCGACACACAACCCCAGCCTAATCAGACGTGTTCGTCTTACACCCCTCAGCACTATCTGACACCTCTGAGAATCACTGACTCTGCAAACCCAGGCACTGATCCGTGTCTTGATGAGCAGCTACGACACTCAGAGACTGAAGCCTCATGTAACACGCAGTTAGAGAGATAAAGAGCTTATATAATTGTACGGTTATTAATGGTAcgattgttaatgttgttttggcTTGAAGATTGAGCTTGAGCCTGCGACTCCCGCTTCCTGCCAGCAGGGGGAAGGGCTCCAATGTCTCATCATTCAATTCAAATCCACTGCTGAAGCCCTGCCCTCACTCCTGTCCTGTACCGCCTGTAATCGGTTCACTACCACACATTAACAGACAGTTGTACATATTTCTTACTTTATAACCTCTCGATATTGCTTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118400 True 2681 lncRNA 0.46 2 32794755 32797498

Neighbor

gene id symbol gene type direction distance location
AMCG00018017 NA coding upstream 142071 32607413 ~ 32652684 (+)
AMCG00018018 NA coding upstream 193261 32594172 ~ 32601494 (+)
AMCG00018019 NA coding upstream 201851 32590175 ~ 32592904 (+)
AMCG00018011 NA coding upstream 333998 32442543 ~ 32460757 (+)
AMCG00018013 NA coding upstream 355749 32429234 ~ 32439006 (+)
AMCG00018026 NA coding downstream 43525 32841023 ~ 32845300 (+)
AMCG00018033 NA coding downstream 115823 32913321 ~ 32914729 (+)
AMCG00018034 NA coding downstream 149370 32946868 ~ 32947806 (+)
AMCG00018030 LOC106609072 coding downstream 178433 32975931 ~ 33015403 (+)
G94899 NA non-coding upstream 32172 32746824 ~ 32762583 (+)
G94858 NA non-coding upstream 258855 32517123 ~ 32535900 (+)
G94792 NA non-coding upstream 444392 32347462 ~ 32350363 (+)
G94763 slc1a1,LOC107691854,LOC107561518 non-coding upstream 557564 32233771 ~ 32237191 (+)
G94739 NA non-coding upstream 629458 32164819 ~ 32165297 (+)
AMCG00018027 NA other upstream 1151 32789441 ~ 32793604 (+)
G94857 LOC106577504,LOC103385245,LOC108267515 other upstream 193306 32507690 ~ 32601449 (+)
G94838 clcn3,LOC106577864 other upstream 328119 32461298 ~ 32466636 (+)
AMCG00018012 NA other upstream 369520 32407429 ~ 32425235 (+)
AMCG00017978 NA other upstream 1962888 30819869 ~ 30831867 (+)

Expression


Co-expression Network