AMCG00018324


Basic Information

Item Value
gene id AMCG00018324
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 8350111 ~ 8351371 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018324
ATGTCGGAGGAGAAACGGGTGGCAGCGGTGGCTGCGGGCTTGGGGCAGGGTGCCCGGGTGGACAGCGTGCGCACTGCCATCGGACAGGAGATGACACACATCCGGGATCTCCCGCATTCCCAGCGCTTTGCCCACAAACCCACGCCAGTGAGCTACCGAGGCGGGCGGCCCATGCACCAGAGCACCCTTAGACTGGGGGGCAGGCCCTCGGAGACCAGCTACACCACCACACAGGCACATTACTTTTCAGGCAGAGGCAGCCATGGGCAGTTGTTGCGAGGTGTGCCCCGAGTGCCACAGTACCCATCTCAGCACCATGGCAGACTGGACCTCGGCACCCTGACCCTGGAGCACTGCCAGCCACACAGCCGGGACACCTTCGGGCCCAAAGAGATCACACCGCACTATATTCTGCACGAGTCTGGCGTGAAGAATCGGCATCACAATCAGCACAGCCTGGCCATGAGAGAAATCACCAACCCTTCGGGCGAGCAGAAAGACTACAGAAGCACGTACAGGACAGAGCACTGCAGTGAAACCCTGCCTTCAGCCTCTACCAGCTGCAGAGGGCTGCCCACAGACTGGCACAATTACAACATCATCACAGGTGAGACACACCTGGACACCGTACTGCAGGCACACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018324 True 645 mRNA 0.61 3 8350111 8351371

Neighbor

gene id symbol gene type direction distance location
AMCG00018325 xylt1,LOC107567884,LOC107729195,LOC107690267,LOC107733871,LOC107590574,LOC107686990,LOC106588898 coding upstream 34570 8290001 ~ 8315541 (+)
AMCG00018320 LOC104942092 coding upstream 182361 8154810 ~ 8167750 (+)
AMCG00018321 NA coding upstream 199561 8140007 ~ 8150550 (+)
AMCG00018318 NA coding upstream 231679 8116069 ~ 8118432 (+)
AMCG00018317 rab40c,LOC107685905,LOC107590575,LOC107567894,LOC107690266 coding upstream 235921 8097388 ~ 8114190 (+)
AMCG00018327 LOC107674142,LOC107732858 coding downstream 48462 8399833 ~ 8404453 (+)
AMCG00018332 LOC106588920,LOC100691027,LOC101464353,LOC102776973,LOC102312408 coding downstream 135195 8486566 ~ 8514892 (+)
AMCG00018333 cp063,fopnl,LOC106564614 coding downstream 190620 8541991 ~ 8543115 (+)
AMCG00018336 myh11,LOC103025732 coding downstream 202217 8553588 ~ 8592721 (+)
AMCG00018335 NA coding downstream 253350 8604721 ~ 8623654 (+)
G115679 NA non-coding upstream 2275 8294416 ~ 8347836 (+)
G115640 NA non-coding upstream 255662 8094200 ~ 8094449 (+)
G115591 NA non-coding upstream 451931 7897940 ~ 7898180 (+)
G115585 NA non-coding upstream 459210 7883205 ~ 7890901 (+)
G115560 NA non-coding upstream 629147 7720607 ~ 7720964 (+)
G115678 NA non-coding downstream 706 8352077 ~ 8372827 (+)
G115796 NA non-coding downstream 351786 8703157 ~ 8704903 (+)
G115873 NA non-coding downstream 510710 8862081 ~ 8862511 (+)
G115875 NA non-coding downstream 517171 8868542 ~ 8870342 (+)
G115896 NA non-coding downstream 684959 9036330 ~ 9036583 (+)
G115648 NA other upstream 227940 8119778 ~ 8122171 (+)
G115590 fbxl16,LOC107685932,LOC107568165,LOC107738613,LOC107568127,LOC107690242 other upstream 455662 7893627 ~ 7894449 (+)
AMCG00018280 NA other upstream 1602673 6710482 ~ 6747438 (+)
AMCG00018272 NA other upstream 2189495 6155488 ~ 6160616 (+)
G115299 NA other upstream 2399094 5949463 ~ 5951017 (+)
G115789 NA other downstream 341993 8693364 ~ 8694719 (+)
AMCG00018358 polr3k,rpc11 other downstream 848286 9199657 ~ 9206776 (+)
AMCG00018360 f100a other downstream 888440 9239811 ~ 9245234 (+)
AMCG00018368 NA other downstream 1088286 9439657 ~ 9447144 (+)
AMCG00018369 NA other downstream 1129581 9480952 ~ 9486146 (+)

Expression


Co-expression Network