AMCG00018385


Basic Information

Item Value
gene id AMCG00018385
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 9708979 ~ 9711300 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018385
CGTTAGATGCTAACTTAACCAAGCAGTGATCTACGGCAGGAAGATCAGGCTTGGTTTTGAAGCACTGCTTACGGCTTCATCATGAAGTGTGCCTTGTTCATATTCTCCATTATGACCATCTTTCACTGGATGGATATGTCCATTTCCCAAGGCTTTTCGGAGTTTGATGCTGTCAATACCTTGGATATGTGGACTTTGGATGTGCAAGGTCCTCCCCAGACAATATCCATGCCTTACAGTAAAGCCAAACTGTGTGGCTATAACCTGAGGATTGTGGAGGATGACCTGATGATCAGAGTTAACTACACTGCAAAGGGGCTTCAGATGTTTGCAAGACCCAGGATCAACAAGACCCTCTACATTGCAGACCTGCTATTGAAATCTCAACGTGGCTATATTAAGGTTAAGATCTATGCGCTGATGCTGTGTTTGCCAGATCCAGTGATCTGCAATGGCACAGATGTCAACCTGGAAATCCCCTCTTTTGCTGGCACGTTCCTCCGTATGGAAGCTGAGGGACAGACCTACCTCCCCTCCCGTCCATCGACTGCAGTCTACATCCAGCGTCTGTGGGACACCCTGCGTGTCACCGTCCCACTCTCCAGTCCCCTGGTGCAAAGGAAGGACTGCATGATTGATGGCAAAGGCAAGGGCTGGAAGAATTTCTTGCCAGAGACTCAACTCACTTTCAAAGTGAGGCGAGAGGAGGCCACTATGGTGTTTTGGCCTGCCTGCCCATGCAAGAGCAGAGGCCTCGGTTCTAGAGGGACACCAGAGATTGCCAATGATGTTCCTGCCTGCATACCTGCCCTCACCCCTTCCAATTCACTTCGGTTTGACATGCCGCGGAACAGTGGATCCATCCTGAAGTTGGTGGATGGCCATATCCTCCATGAAAAACACCAGACTCTGGCTTTTGGGCCAGCTGCTGAGGAGAAGACGAGGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018385 True 948 mRNA 0.50 10 9708979 9711300

Neighbor

gene id symbol gene type direction distance location
AMCG00018395 NA coding upstream 17401 9690826 ~ 9691578 (+)
AMCG00018383 NA coding upstream 23459 9675688 ~ 9685520 (+)
AMCG00018371 NA coding upstream 147844 9545541 ~ 9561135 (+)
AMCG00018373 NA coding upstream 187992 9519667 ~ 9520987 (+)
AMCG00018365 aanat2,LOC107672440,LOC107670449,LOC107596820,LOC106934031 coding upstream 349293 9354703 ~ 9359686 (+)
AMCG00018384 NA coding downstream 14482 9725782 ~ 9729487 (+)
AMCG00018388 NA coding downstream 22911 9734211 ~ 9740498 (+)
AMCG00018387 NA coding downstream 30299 9741599 ~ 9744668 (+)
AMCG00018389 NA coding downstream 44446 9755746 ~ 9760627 (+)
AMCG00018386 si:ch211-256e16.3,LOC106601741,LOC105026145,LOC107674048,LOC107552129,LOC108412900,LOC107717492 coding downstream 57468 9768768 ~ 9774480 (+)
G116035 dnah3,LOC107561106 non-coding upstream 90074 9618670 ~ 9618905 (+)
G116034 dnah3,LOC108263105 non-coding upstream 95198 9612982 ~ 9613781 (+)
G116028 NA non-coding upstream 129882 9578837 ~ 9579097 (+)
G116027 NA non-coding upstream 131379 9577396 ~ 9577600 (+)
G116026 NA non-coding upstream 131788 9576990 ~ 9577191 (+)
G116199 NA non-coding downstream 321253 10032553 ~ 10041833 (+)
G116214 NA non-coding downstream 408877 10120177 ~ 10121558 (+)
G116264 NA non-coding downstream 504087 10215387 ~ 10216789 (+)
G116300 NA non-coding downstream 633435 10344735 ~ 10345082 (+)
G116301 NA non-coding downstream 639664 10350964 ~ 10351562 (+)
AMCG00018380 NA other upstream 96061 9606661 ~ 9612918 (+)
AMCG00018372 LOC106517353,LOC107388090,LOC103381742,LOC101078739,LOC103481046,LOC108270924,LOC108413555 other upstream 144415 9562061 ~ 9564564 (+)
AMCG00018374 NA other upstream 195743 9512314 ~ 9513236 (+)
AMCG00018369 NA other upstream 222833 9480952 ~ 9486146 (+)
AMCG00018368 NA other upstream 261835 9439657 ~ 9447144 (+)
AMCG00018405 NA other downstream 292973 10004273 ~ 10012673 (+)
AMCG00018406 NA other downstream 333152 10044452 ~ 10046523 (+)
AMCG00018422 NA other downstream 546505 10257805 ~ 10292261 (+)
AMCG00018449 msrb1,LOC107376545,LOC105933050 other downstream 1541059 11252359 ~ 11256165 (+)
G116585 rbbp6,LOC107689611 other downstream 2254947 11966247 ~ 11970778 (+)

Expression


Co-expression Network