Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00018395 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030135.1 |
| NCBI id | CM030135.1 |
| chromosome length | 28454832 |
| location | 9690826 ~ 9691578 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0007218 | neuropeptide signaling pathway | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0030273 | melanin-concentrating hormone receptor activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00018395 | True | 753 | mRNA | 0.57 | 1 | 9690826 | 9691578 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00018383 | NA | coding | upstream | 5306 | 9675688 ~ 9685520 (+) |
| AMCG00018371 | NA | coding | upstream | 129691 | 9545541 ~ 9561135 (+) |
| AMCG00018373 | NA | coding | upstream | 169839 | 9519667 ~ 9520987 (+) |
| AMCG00018365 | aanat2,LOC107672440,LOC107670449,LOC107596820,LOC106934031 | coding | upstream | 331140 | 9354703 ~ 9359686 (+) |
| AMCG00018366 | NA | coding | upstream | 394921 | 9291332 ~ 9295905 (+) |
| AMCG00018385 | NA | coding | downstream | 17401 | 9708979 ~ 9711300 (+) |
| AMCG00018384 | NA | coding | downstream | 34204 | 9725782 ~ 9729487 (+) |
| AMCG00018388 | NA | coding | downstream | 42633 | 9734211 ~ 9740498 (+) |
| AMCG00018387 | NA | coding | downstream | 50021 | 9741599 ~ 9744668 (+) |
| AMCG00018389 | NA | coding | downstream | 64168 | 9755746 ~ 9760627 (+) |
| G116035 | dnah3,LOC107561106 | non-coding | upstream | 71921 | 9618670 ~ 9618905 (+) |
| G116034 | dnah3,LOC108263105 | non-coding | upstream | 77045 | 9612982 ~ 9613781 (+) |
| G116028 | NA | non-coding | upstream | 111729 | 9578837 ~ 9579097 (+) |
| G116027 | NA | non-coding | upstream | 113226 | 9577396 ~ 9577600 (+) |
| G116026 | NA | non-coding | upstream | 113635 | 9576990 ~ 9577191 (+) |
| G116199 | NA | non-coding | downstream | 340975 | 10032553 ~ 10041833 (+) |
| G116214 | NA | non-coding | downstream | 428599 | 10120177 ~ 10121558 (+) |
| G116264 | NA | non-coding | downstream | 523809 | 10215387 ~ 10216789 (+) |
| G116300 | NA | non-coding | downstream | 653157 | 10344735 ~ 10345082 (+) |
| G116301 | NA | non-coding | downstream | 659386 | 10350964 ~ 10351562 (+) |
| AMCG00018380 | NA | other | upstream | 77908 | 9606661 ~ 9612918 (+) |
| AMCG00018372 | LOC106517353,LOC107388090,LOC103381742,LOC101078739,LOC103481046,LOC108270924,LOC108413555 | other | upstream | 126262 | 9562061 ~ 9564564 (+) |
| AMCG00018374 | NA | other | upstream | 177590 | 9512314 ~ 9513236 (+) |
| AMCG00018369 | NA | other | upstream | 204680 | 9480952 ~ 9486146 (+) |
| AMCG00018368 | NA | other | upstream | 243682 | 9439657 ~ 9447144 (+) |
| AMCG00018405 | NA | other | downstream | 312695 | 10004273 ~ 10012673 (+) |
| AMCG00018406 | NA | other | downstream | 352874 | 10044452 ~ 10046523 (+) |
| AMCG00018422 | NA | other | downstream | 566227 | 10257805 ~ 10292261 (+) |
| AMCG00018449 | msrb1,LOC107376545,LOC105933050 | other | downstream | 1560781 | 11252359 ~ 11256165 (+) |
| G116585 | rbbp6,LOC107689611 | other | downstream | 2274669 | 11966247 ~ 11970778 (+) |
