Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00018425 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030135.1 |
| NCBI id | CM030135.1 |
| chromosome length | 28454832 |
| location | 10299003 ~ 10299554 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0031017 | exocrine pancreas development | biological_process |
| id | description |
|---|---|
| K08040 | BHLHB8, MIST1; class B basic helix-loop-helix protein 8 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00018425 | True | 552 | mRNA | 0.65 | 1 | 10299003 | 10299554 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00018411 | NA | coding | upstream | 124707 | 10160464 ~ 10174296 (+) |
| AMCG00018414 | pms2 | coding | upstream | 139360 | 10150965 ~ 10159643 (+) |
| AMCG00018413 | NA | coding | upstream | 148230 | 10137980 ~ 10150773 (+) |
| AMCG00018412 | LOC108437157,LOC107710695,LOC102303741,LOC101486233 | coding | upstream | 178949 | 10100924 ~ 10120054 (+) |
| AMCG00018415 | NA | coding | upstream | 204359 | 10089422 ~ 10094644 (+) |
| AMCG00018423 | bri3 | coding | downstream | 33967 | 10333521 ~ 10342424 (+) |
| AMCG00018426 | NA | coding | downstream | 132636 | 10432190 ~ 10440657 (+) |
| AMCG00018429 | trrap,LOC107699870 | coding | downstream | 197319 | 10496873 ~ 10562962 (+) |
| AMCG00018432 | trrap | coding | downstream | 275342 | 10574896 ~ 10609128 (+) |
| AMCG00018434 | NA | coding | downstream | 625482 | 10925036 ~ 10934367 (+) |
| G116264 | NA | non-coding | upstream | 82214 | 10215387 ~ 10216789 (+) |
| G116214 | NA | non-coding | upstream | 177445 | 10120177 ~ 10121558 (+) |
| G116199 | NA | non-coding | upstream | 257170 | 10032553 ~ 10041833 (+) |
| G116088 | NA | non-coding | upstream | 551616 | 9689765 ~ 9747387 (+) |
| G116035 | dnah3,LOC107561106 | non-coding | upstream | 680098 | 9618670 ~ 9618905 (+) |
| G116300 | NA | non-coding | downstream | 45181 | 10344735 ~ 10345082 (+) |
| G116301 | NA | non-coding | downstream | 51410 | 10350964 ~ 10351562 (+) |
| G116302 | NA | non-coding | downstream | 56418 | 10355972 ~ 10357357 (+) |
| G116303 | NA | non-coding | downstream | 60128 | 10359682 ~ 10359903 (+) |
| G116354 | NA | non-coding | downstream | 438732 | 10738286 ~ 10739175 (+) |
| AMCG00018422 | NA | other | upstream | 6742 | 10257805 ~ 10292261 (+) |
| AMCG00018406 | NA | other | upstream | 252480 | 10044452 ~ 10046523 (+) |
| AMCG00018405 | NA | other | upstream | 286330 | 10004273 ~ 10012673 (+) |
| AMCG00018380 | NA | other | upstream | 686085 | 9606661 ~ 9612918 (+) |
| AMCG00018372 | LOC106517353,LOC107388090,LOC103381742,LOC101078739,LOC103481046,LOC108270924,LOC108413555 | other | upstream | 734439 | 9562061 ~ 9564564 (+) |
| AMCG00018449 | msrb1,LOC107376545,LOC105933050 | other | downstream | 952805 | 11252359 ~ 11256165 (+) |
| G116585 | rbbp6,LOC107689611 | other | downstream | 1666693 | 11966247 ~ 11970778 (+) |
| AMCG00018493 | prpsap2,LOC107737786,LOC107581734,LOC107720040,LOC107654541 | other | downstream | 2189913 | 12489467 ~ 12500054 (+) |
| AMCG00018491 | slc5a10 | other | downstream | 2203469 | 12503023 ~ 12520331 (+) |
| AMCG00018498 | NA | other | downstream | 2243991 | 12543545 ~ 12611879 (+) |
