AMCG00018482 (plk1,LOC102776063)


Basic Information

Item Value
gene id AMCG00018482
gene name plk1,LOC102776063
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 12195542 ~ 12202096 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018482
TGGATTTCAAATCGGGCCGACCAATCACAGGCGCCGCTCCCGCTTTTAACGAACGGTGCTAGATTTGAAATGCTGCGGCAGCGACAGGCTCAGTATCGCTGGAGAGAGACGGGGGCCAGGACGGACTGTCACTGGGGAGTGAGGGCTGGCTCAAGGAATTtaaatagcatatatatattttttgcacatCACATTATCGCCGCGGTTTGAGTATATAAGCTATTTTCCTGCATGAGGCGAAAGCGCGTATTGGGGGTTGACAGTAAGACTGCGTTTTGATTTGAATTGAGGACACTTTCGATGCAGCCTAGTCTCAGTAGTGCCTTGTGACTGACTGCTGTCGTTTCCGTTTTGTTGCTGAtttaagttatatatttatgttgtgaGAGGCATACTTGAAACCTACGAAGAACTGATTTTATTAAGAGCTGTTTACAACATGAGCGCAGCACCAGTAAAGGCGGTGAAGCCCTCGGCGCACGTTGACCCCAAGTCGGCCCCTTTGAAGGAGATCCCCGATATTCTGGTGGACCCCCGGACCAAGAAGAGGTACCTAAGGGGCAGGTTTCTGGGGAAAGGTGGCTTTGCGAAATGCTACGAGATCACGGACATGGACACGAAAGAGGTCTTCGCCGGGAAGGTCGTCCCGAAGTCGATGCTGCTGAAGCCGCACCAGAAGGAGAAAATGTCCATGGAGATCACGATCCACAAAAGCCTCAATAACGCCCATGTGGTGGGCTTTCACGGGTTTTTCGAGGACGATGATTTCGTGTATGTGGTTCTGGAGATCTGCCGGAGAAGGTCTCTGTTGGAGCTGCACAAGAGGAGGAAGGCAGTGACAGAACCAGAAGCACGCTACTATATGAGGCAGACTATTGTAGGATGCCAGTATCTCCATAACAACCGAGTCATCCACAGAGACCTCAAGCTGGGCAACCTCTTTCTGAATGATGAGATGGAGGTCAAGATAGGTGATTTTGGCCTGGCCACAAAGATAGAGTACGACGGTGAGAGGAAGAAGACCCTGTGTGGGACGCCCAACTACATTGCCCCTGAGGTTCTGTGCAAGAAGGGCCACAGCTTTGAGGTTGACATCTGGTCATTGGGCTGCATCCTCTACACACTACTGGTTGGGAAGCCTCCCTTTGAGACCTCCTGCCTGAAGGAGACGTACATCCGCATCAAGAAGAATGACTACACCGTTCCCAGGCACATTAACCCCGTTGCAACCGCCTTGATTAAGAGGATGCTGCATGCCGATCCCACGAGGCCTGACAGTCCTGCAGAGAAGATGGGCAAGCTTGAGCAGAAGGAGGATCCCCAGCTCGGGGAGGGCCAGGAGGCTGTGGACAGCCACCTGACGGACCTGCTGCAGCAGCTCTCCAGTGTCAACATGTCCAAACCCTCGGAGAGAGTGCTAATCAGACAAGaGGAGGCTGAGGACCCCGCCTGCATCCCCATTTTTTGGATCAGCAAGTGGGTGGACTACTCCGACAAGTACGGCCTTGGGTACCAACTGTGTGACAACAGTGTGGGCGTATTGTTCAACGACTCTACTCGGCTCATCATGTATGACGACGGTGACAGCCTCCAGTACATTGAGAGGAACAACTCGGAGTCCTATCTCAGCGTGCGCTCCTACCCACCTGTGCTCACCAAAAAGATCACACTGCTGAAGTATTTCCGGAACTACATGAGTGAGCACCTGCTGAAAGCTGGTGCCAACATCACCCCGCGGGACGGTGACGAACTGGCCCGCCTGCCCTTCCTGCGCCACTGGTTCCGCACCAAGAGTGCCATCGTGCTGCACCTGAGCAACGGCACCGTGCAGATCAACTTCTTCCAGGACCACACAAAAATCATCCTGTGCCCACTGATGGCGGCGGTAACATACATTGACGAGAAGAGGGAGTTCCGCACCTACAAACTGAGCCTGATCGAGGAGCACGGCTGCTGCAAGGAGCTGGCCAGCCGGCTGCGCTACGCCCGCACTATGGTGGAGAAGCTGATGGCCTGCAAGTCCACCGCGGCCCGCAAGACCGTGGCCCCTTGAGCCCCTGGACTGAGTCCCCACAACGCCCTGTAAATACTCCCACCTCCTCACCTCTGCTTTTATCTTGAACAGACTGCTCCTGAGGTCTACAAAGCTACTGTTGGCCAAATTTGGTTCCGGATTTTTTATCAGCGTTGTTTCACTCAAACGTACCACACCagagttttatattttacaagcTTGGATTGAAATCCAGGCTGTTGTATAGTtgaatgcacatttttatatcTTCATGGTTCCAGCGCCAACTGTGTTCAATCTGTAATACTCGCCTTGAATCAAGACTGTAGGTAAAGGAAACCATCATGTATGCTCTTTGGGTGTCTGTTCATACTTTTACTTGGGAGTCTTAtgtgttttttagttgttggtttgtctttctgtaaaaaaatctaaactccACTGTATAAAACTGTTCTGAATATAGCAGTACATTGTTTAGTGTACGTTtcctttatatttcaaataaagattCTTTAAAATCTGGA

Function

symbol description
plk1 Predicted to enable protein serine/threonine kinase activity. Acts upstream of or within mitotic cell cycle and retina development in camera-type eye. Predicted to be located in midbody. Predicted to be active in cytoplasm; microtubule cytoskeleton; and nucleus. Is expressed in several structures, including immature eye; nervous system; neural tube; pharynx; and tail bud. Human ortholog(s) of this gene implicated in urinary bladder cancer. Orthologous to human PLK1 (polo like kinase 1).

NR:

description
PREDICTED: serine/threonine-protein kinase PLK1

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0000278 mitotic cell cycle biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K06631 PLK1; polo-like kinase 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018482 True 2541 mRNA 0.51 11 12195542 12202096

Neighbor

gene id symbol gene type direction distance location
AMCG00018481 NA coding upstream 8214 12186690 ~ 12187328 (+)
AMCG00018477 dctn5,LOC107579625,LOC107590401,LOC107719975,LOC105899917 coding upstream 31735 12151389 ~ 12163807 (+)
AMCG00018478 tnrc6a,LOC107601257 coding upstream 78714 12073105 ~ 12116828 (+)
AMCG00018475 NA coding upstream 208488 11967889 ~ 11987054 (+)
AMCG00018476 NA coding upstream 229212 11956229 ~ 11966330 (+)
AMCG00018483 NA coding downstream 32915 12235011 ~ 12270627 (+)
AMCG00018487 traf7,LOC107719978,LOC107601260,LOC107590399 coding downstream 91881 12293977 ~ 12312814 (+)
AMCG00018492 NA coding downstream 328462 12530558 ~ 12539267 (+)
AMCG00018497 epn2,LOC107738009,LOC104959799 coding downstream 417264 12619360 ~ 12648880 (+)
AMCG00018500 NA coding downstream 512011 12714107 ~ 12738068 (+)
G116603 NA non-coding upstream 53407 12139002 ~ 12142135 (+)
G116601 NA non-coding upstream 68843 12126450 ~ 12126699 (+)
G116546 NA non-coding upstream 377453 11728809 ~ 11818089 (+)
G116479 NA non-coding upstream 779804 11415481 ~ 11415738 (+)
G116477 NA non-coding upstream 783472 11410805 ~ 11412070 (+)
G116653 NA non-coding downstream 70493 12272589 ~ 12273496 (+)
G116654 NA non-coding downstream 76334 12278430 ~ 12278840 (+)
G116667 NA non-coding downstream 85473 12287569 ~ 12319488 (+)
G116725 NA non-coding downstream 498405 12700501 ~ 12700765 (+)
G116728 NA non-coding downstream 677490 12879586 ~ 12883914 (+)
G116585 rbbp6,LOC107689611 other upstream 224764 11966247 ~ 11970778 (+)
AMCG00018449 msrb1,LOC107376545,LOC105933050 other upstream 939377 11252359 ~ 11256165 (+)
AMCG00018422 NA other upstream 1903281 10257805 ~ 10292261 (+)
AMCG00018406 NA other upstream 2149019 10044452 ~ 10046523 (+)
AMCG00018405 NA other upstream 2182869 10004273 ~ 10012673 (+)
AMCG00018493 prpsap2,LOC107737786,LOC107581734,LOC107720040,LOC107654541 other downstream 287371 12489467 ~ 12500054 (+)
AMCG00018491 slc5a10 other downstream 300927 12503023 ~ 12520331 (+)
AMCG00018498 NA other downstream 341449 12543545 ~ 12611879 (+)
G116832 NA other downstream 1051247 13253343 ~ 13255794 (+)
AMCG00018520 slc29a4,LOC107703421,LOC107737679,LOC107581724 other downstream 1105802 13307898 ~ 13346877 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location