AMCG00018492


Basic Information

Item Value
gene id AMCG00018492
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 12530558 ~ 12539267 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018492
ATGCCGGCTGTGTGTTTCCGATCAATTCATCGTGACTTTTCCAGTTCTGCGTGTCCAGTTAGTGCTCGACCATCCGCCTCCTGTCCTCCCGGCGCGGCTTGTGTCCCGCATGACGGCGCTCAGGTGGAACTGGATCAGCGCGTCTCCTGCGGGAGTCTGCGGCCCCGCCTCCAGCCACACCCCGATTCAGTGGGATGTGTGGATCCAGAGGAGTGTGTCAAGGTGTGTGGTGCGGAAGTGGGCTGCTCTAACATCGCCTTCCCCAAGCTGGTCATCGAGCTGTTGCCAAGTGGTCTTCGGGGGCTAATGATCGCCGTGATGATGGCTGCCCTCATGTCCTCCCTCACCTCCATcttcaacagcagcagcacgcTCTTCACCATGGACATCTGGAAGAAGATTGTCACGGTCATCCTGGTGGCCATCAGCGTTGTGTGGATCCCCATTCTGCAGAGTGCCAACAGCGGCCAGCTCTATGTGTACATCCAGTCTGTCACCAGCTACCTAGCGCCACCCGTCACTGCCATCTTCGTTCTAGCTGTCTTCTGGAGGAGGACCAATGAAGCCgGGGCATTCTGGGGGCTGATGGTTGGGCTGGCGGCAGGTCTGACCCGTATGATCATGGAGTTTGcatacccccccccccgctgcgGCATGCTGGACCCTCGGCCCTCTGTGCTCAGCAGTGTCCACTACCTGCACTTCGCCATATTGCTGTGTGCCCTGACCAGTGGGGTGATCAAAAACCTGACGTGGTGGACCCTGACCCAGGAGAAGCCCGACCCCGATATCCCCCTGCAGAAAGTGTCTCCTGTGGAAGAGTCGACAGAACAAACACCAAACAGTGGGGAGACGGAACGGCGTGGGACATGTGGGCGGGGGGTGGGTggcggcagcagcagccgcAGGACGTTTTGTGGCTCTCAGTCTAACCAAGCCGCAGCAGCCCCCAACCCCCCTGTCATCCACAGCATCAGGGAAAACCCATTCTGGGCCCGGTTCTGCTGCATCAATGCCATCATCCTCCTGTGCATCAACATCTTCTTCTACGCCTACTTTGCCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018492 True 1065 mRNA 0.59 7 12530558 12539267

Neighbor

gene id symbol gene type direction distance location
AMCG00018487 traf7,LOC107719978,LOC107601260,LOC107590399 coding upstream 217744 12293977 ~ 12312814 (+)
AMCG00018483 NA coding upstream 259931 12235011 ~ 12270627 (+)
AMCG00018482 plk1,LOC102776063 coding upstream 328462 12195542 ~ 12202096 (+)
AMCG00018481 NA coding upstream 343230 12186690 ~ 12187328 (+)
AMCG00018477 dctn5,LOC107579625,LOC107590401,LOC107719975,LOC105899917 coding upstream 366751 12151389 ~ 12163807 (+)
AMCG00018497 epn2,LOC107738009,LOC104959799 coding downstream 80093 12619360 ~ 12648880 (+)
AMCG00018500 NA coding downstream 174840 12714107 ~ 12738068 (+)
AMCG00018501 LOC107376712,LOC106516530,LOC103393184,LOC108242978 coding downstream 245424 12784691 ~ 12819143 (+)
AMCG00018502 cacna1h,LOC108430011 coding downstream 296957 12836224 ~ 12878881 (+)
AMCG00018503 znf598 coding downstream 345920 12885187 ~ 12904501 (+)
G116667 NA non-coding upstream 211070 12287569 ~ 12319488 (+)
G116654 NA non-coding upstream 251718 12278430 ~ 12278840 (+)
G116653 NA non-coding upstream 257062 12272589 ~ 12273496 (+)
G116603 NA non-coding upstream 388423 12139002 ~ 12142135 (+)
G116601 NA non-coding upstream 403859 12126450 ~ 12126699 (+)
G116725 NA non-coding downstream 161234 12700501 ~ 12700765 (+)
G116728 NA non-coding downstream 340319 12879586 ~ 12883914 (+)
G116765 NA non-coding downstream 365833 12905100 ~ 12958552 (+)
G116769 NA non-coding downstream 393673 12932940 ~ 12934564 (+)
G116775 NA non-coding downstream 507850 13047117 ~ 13048094 (+)
AMCG00018491 slc5a10 other upstream 10227 12503023 ~ 12520331 (+)
AMCG00018493 prpsap2,LOC107737786,LOC107581734,LOC107720040,LOC107654541 other upstream 30504 12489467 ~ 12500054 (+)
G116585 rbbp6,LOC107689611 other upstream 559780 11966247 ~ 11970778 (+)
AMCG00018449 msrb1,LOC107376545,LOC105933050 other upstream 1274393 11252359 ~ 11256165 (+)
AMCG00018422 NA other upstream 2238297 10257805 ~ 10292261 (+)
AMCG00018498 NA other downstream 4278 12543545 ~ 12611879 (+)
G116832 NA other downstream 714076 13253343 ~ 13255794 (+)
AMCG00018520 slc29a4,LOC107703421,LOC107737679,LOC107581724 other downstream 768631 13307898 ~ 13346877 (+)
AMCG00018537 radil,LOC107725399,LOC107722964,LOC107590699,LOC107564693 other downstream 1458642 13997909 ~ 14022806 (+)
G117033 NA other downstream 1506992 14046259 ~ 14049153 (+)

Expression


Co-expression Network