AMCG00018566


Basic Information

Item Value
gene id AMCG00018566
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 14445220 ~ 14446081 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018566
ATGACCGGTACGCGGATCTCCGTCCAGCTGCCCCCCAACATCGACCCCACCAAGGCTCCAGTGGCGTTTGGGGACCGGGCGGTGCCCAGGCTGTCCCGGGAGTTGCGCAGCGCGGAGCTGTTGACCCGCCAGCGGGCCCTGATGTCGCTGTGCTGTCTAGAGAGTCTGAAGCTGCTGCTGTGTGACGAGGACAGCACTGTGCGGCTGAAGACCACAGAGTTGCTGTACCTGCTGGCCAATCACAACAGTGGCAGGGAGGCGCTCCTGAGCAGTGATGTCATCTCTCCGCTGTCTGACCTCCTGGAGGAGCCGCTGGAGGCGTGTCGCTGGAACACCCACAGGGTGCTGCAGGCGCTGGCCGAGCTCCCCCCAGGTAAGCAGAAGCTGCCCCACATACCTGGATACACCTGCACCACACCTCTGCACGAATACCTGGGCACCTGCAGCGCACACCTGGAGAAATCTGCATCACAACTGGAGAACAGCTGCATTAAACAGCCTAACTTCACAGAGTGA

Function

GO: NA

KEGG:

id description
ko03030 DNA replication

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018566 True 516 mRNA 0.62 3 14445220 14446081

Neighbor

gene id symbol gene type direction distance location
AMCG00018565 sppl3 coding upstream 13594 14420275 ~ 14431626 (+)
AMCG00018569 unc119.1,unc119b,LOC107712459,LOC107753165,LOC107550938,LOC107687994 coding upstream 38242 14404406 ~ 14406978 (+)
AMCG00018570 NA coding upstream 51376 14392309 ~ 14393844 (+)
AMCG00018568 NA coding upstream 55874 14389026 ~ 14389346 (+)
AMCG00018558 NA coding upstream 77259 14361036 ~ 14367961 (+)
AMCG00018580 NA coding downstream 30837 14476918 ~ 14478333 (+)
AMCG00018579 NA coding downstream 32999 14479080 ~ 14495801 (+)
AMCG00018578 LOC104951472,LOC102789619,LOC107752382,LOC102207611 coding downstream 52518 14498599 ~ 14504059 (+)
AMCG00018576 slc5a1,LOC107713298,LOC106563210,LOC105913283,LOC105014972 coding downstream 65157 14511238 ~ 14519019 (+)
AMCG00018575 NA coding downstream 73771 14519852 ~ 14529437 (+)
G117197 NA non-coding upstream 6129 14437992 ~ 14439091 (+)
G117131 NA non-coding upstream 199902 14244708 ~ 14245318 (+)
G117130 NA non-coding upstream 201017 14242864 ~ 14244203 (+)
G116976 NA non-coding upstream 598128 13846890 ~ 13847092 (+)
G116975 NA non-coding upstream 605249 13839716 ~ 13839971 (+)
G117209 NA non-coding downstream 87882 14533963 ~ 14534200 (+)
G117353 NA non-coding downstream 290015 14736096 ~ 14738327 (+)
G117381 NA non-coding downstream 337425 14783506 ~ 14784333 (+)
G117382 NA non-coding downstream 339944 14786025 ~ 14786487 (+)
G117387 NA non-coding downstream 346715 14792796 ~ 14793804 (+)
AMCG00018567 NA other upstream 32941 14408958 ~ 14412279 (+)
AMCG00018564 mlec,LOC106579938 other upstream 45681 14330841 ~ 14399539 (+)
G117178 NA other upstream 97479 14345090 ~ 14347741 (+)
AMCG00018551 NA other upstream 202503 14239242 ~ 14242717 (+)
AMCG00018553 cryba4,LOC106568369,LOC106563090 other upstream 254143 14189003 ~ 14191077 (+)
G117379 rplp0,LOC107701857,LOC107654305,LOC107591459 other downstream 328034 14774115 ~ 14777110 (+)
G117383 NA other downstream 340542 14786623 ~ 14788133 (+)
AMCG00018602 LOC102789415 other downstream 508483 14954564 ~ 14981705 (+)
G117786 LOC101064881,LOC103134930,LOC106938822,LOC106933658,LOC103469853,LOC105937727 other downstream 2622131 17068212 ~ 17069670 (+)
AMCG00018681 NA other downstream 3535059 17981140 ~ 17983017 (+)

Expression


Co-expression Network