AMCG00018620


Basic Information

Item Value
gene id AMCG00018620
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 15668815 ~ 15669669 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018620
atGACACTTTCACCAGTGTTGCCTCTGGATAGCTTTGGCAATGTGCTGTTATTCCTCTTTAACATAATATTGGCCACTGCCATCATATTTCTGAACGTGTCGGTGTTTCTGTCCATTGTCCTGAACAAGCTGCTCCGGCTGGAGAACCGGGCTATGTACATGTTAAGTACCTGCTCCAGCGACGTCTGCTCCGGGGTCTCCTATTATTATGTCGGCGCCATAAACGTGCGGGACAGCTACGATTCCCCCACCAGGACCTTCTATATAGCGCCCACGTTTCTGGGCCTGTCCTTCATGGCCACTCTGGCAGCGCAAGCAGACCGCTATCACGCCGTGGCGGCGCCCTTCCGCTACTCCCAGAGAGTGAGCCGCGGCCGCACGGCGCTGGTGCTCTGCGCTCTCTGGGTGTACGCTTTCTGCATCGTGGCGGTTAACAACTTAGTGACGGTCGGGGTCGCCAAACAGGTTACGGGTTTCGGGACGTTTGTGGGCAACATCTGCGCGGTCACCATCATGATAGGGCTCAATATCAAGTTATTCATCATAGCCAAGTACCAGCTGAGAAGAGACCCTCCGTCCCTAGAGCGGGACAGCAAGAGAGCCTCCATATACCTGATCGTGGTGGTGGCTGTGTTTTTTCTAGTGGCTTGGTTACCTATTTTCATTCATATCATCGTGTGTAACTTCGCAGGATCCCCATGCTACTCTTTCCGAAACGAAGGCACCGACCCGCTCCGGACCCTGCCCCGGCTGAACGCGGCCCTCACCCCGCTGCTGTACCTGCGGGGCTGCGTTCAGCTCCGGGAGACCCTGTTTAGTAAAGTTTGGAAACCGGTCTGCAGAAAGCACAGGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018620 True 855 mRNA 0.55 1 15668815 15669669

Neighbor

gene id symbol gene type direction distance location
AMCG00018618 NA coding upstream 20640 15637974 ~ 15648175 (+)
AMCG00018619 NA coding upstream 83728 15583593 ~ 15585087 (+)
AMCG00018611 ppil2 coding upstream 200433 15430284 ~ 15468382 (+)
AMCG00018603 ufd1l coding upstream 714552 14949636 ~ 14954263 (+)
AMCG00018608 cldn5,LOC103357131 coding upstream 741291 14927162 ~ 14927524 (+)
AMCG00018624 NA coding downstream 12786 15682455 ~ 15691741 (+)
AMCG00018623 NA coding downstream 102640 15772309 ~ 15777303 (+)
AMCG00018625 NA coding downstream 116224 15785893 ~ 15790897 (+)
AMCG00018630 tbx1,LOC102781442 coding downstream 342618 16012287 ~ 16025098 (+)
AMCG00018635 NA coding downstream 586528 16256197 ~ 16278801 (+)
G117557 NA non-coding upstream 41096 15627339 ~ 15627719 (+)
G117521 NA non-coding upstream 139474 15492246 ~ 15529341 (+)
G117380 NA non-coding upstream 768897 14855079 ~ 14899918 (+)
G117389 NA non-coding upstream 871665 14796531 ~ 14797150 (+)
G117388 NA non-coding upstream 874576 14793885 ~ 14794239 (+)
G117574 NA non-coding downstream 23544 15693213 ~ 15695253 (+)
G117573 NA non-coding downstream 25757 15695426 ~ 15698865 (+)
G117660 NA non-coding downstream 413684 16083353 ~ 16121445 (+)
G117768 NA non-coding downstream 1079200 16748869 ~ 16749971 (+)
G117783 NA non-coding downstream 1339229 17008898 ~ 17009246 (+)
AMCG00018602 LOC102789415 other upstream 687110 14954564 ~ 14981705 (+)
G117383 NA other upstream 880682 14786623 ~ 14788133 (+)
G117379 rplp0,LOC107701857,LOC107654305,LOC107591459 other upstream 891705 14774115 ~ 14777110 (+)
AMCG00018567 NA other upstream 1256536 14408958 ~ 14412279 (+)
G117178 NA other upstream 1321074 14345090 ~ 14347741 (+)
G117786 LOC101064881,LOC103134930,LOC106938822,LOC106933658,LOC103469853,LOC105937727 other downstream 1398543 17068212 ~ 17069670 (+)
AMCG00018681 NA other downstream 2311471 17981140 ~ 17983017 (+)
AMCG00018702 NA other downstream 3049537 18719206 ~ 18721343 (+)
AMCG00018712 NA other downstream 3157928 18827597 ~ 18840095 (+)
AMCG00018717 trpv4,LOC106585668 other downstream 3224666 18894335 ~ 18908956 (+)

Expression


Co-expression Network