AMCG00018697


Basic Information

Item Value
gene id AMCG00018697
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 18527743 ~ 18528121 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018697
TAGAAATTAGTGTAGATGCAGATTTTAACGTGTATTTTGTCCCCTATCACCTGCAGTACCTCCATAACAACGGCATAATCCACAGGGATCTTAAGCCAGAGAACGTACTTCTCGCCTCAAGTGATGACATCTGCCTCATTAAGCCTACCTACCTCGCCCCCGAGGTTTTTACAGATGTAGTGACCATTGGCTACAGTCGGGCGGTGGACTGTTGGGAGTCTGGGagtgctgttgtttgtt

Function

GO:

id name namespace
GO:0016772 transferase activity, transferring phosphorus-containing groups molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018697 True 240 mRNA 0.48 2 18527743 18528121

Neighbor

gene id symbol gene type direction distance location
AMCG00018698 NA coding upstream 89959 18345957 ~ 18437784 (+)
AMCG00018686 NA coding upstream 388202 18138045 ~ 18139541 (+)
AMCG00018685 prodha,LOC100695866,LOC108439536,LOC107373658,LOC106514456 coding upstream 492115 18023027 ~ 18035628 (+)
AMCG00018678 LOC104923679,LOC100329495,LOC107386260,LOC102231850,LOC107599169 coding upstream 568218 17933745 ~ 17959525 (+)
AMCG00018679 nf2,nf2a,LOC108431713,LOC107726729,LOC107599150 coding upstream 660758 17840752 ~ 17866985 (+)
AMCG00018693 NA coding downstream 34412 18562533 ~ 18571339 (+)
AMCG00018691 LOC103397299,LOC106580116,LOC107704964 coding downstream 62845 18590966 ~ 18605862 (+)
AMCG00018692 lztr1,LOC107755835,LOC107704547,LOC107668721 coding downstream 118398 18646519 ~ 18659398 (+)
AMCG00018701 NA coding downstream 157018 18685139 ~ 18690239 (+)
AMCG00018708 NA coding downstream 200915 18729036 ~ 18729506 (+)
G118005 LOC101154678 non-coding upstream 309644 18217803 ~ 18218099 (+)
G117959 NA non-coding upstream 546804 17979011 ~ 17980939 (+)
G117887 NA non-coding upstream 942631 17584751 ~ 17585112 (+)
G117813 NA non-coding upstream 1274720 17250869 ~ 17253023 (+)
G117808 znrf3,LOC106584905 non-coding upstream 1303134 17224012 ~ 17224609 (+)
G118043 LOC104945943 non-coding downstream 146153 18674274 ~ 18676226 (+)
G118285 NA non-coding downstream 928021 19456142 ~ 19456983 (+)
G118290 wscd2,LOC107597274,LOC107743343,LOC107696066 non-coding downstream 939702 19467823 ~ 19473460 (+)
G118291 NA non-coding downstream 951570 19479691 ~ 19479956 (+)
G118304 NA non-coding downstream 1048843 19576964 ~ 19579031 (+)
AMCG00018681 NA other upstream 544726 17981140 ~ 17983017 (+)
G117786 LOC101064881,LOC103134930,LOC106938822,LOC106933658,LOC103469853,LOC105937727 other upstream 1458073 17068212 ~ 17069670 (+)
AMCG00018602 LOC102789415 other upstream 3546038 14954564 ~ 14981705 (+)
G117383 NA other upstream 3739610 14786623 ~ 14788133 (+)
G117379 rplp0,LOC107701857,LOC107654305,LOC107591459 other upstream 3750633 14774115 ~ 14777110 (+)
AMCG00018702 NA other downstream 191085 18719206 ~ 18721343 (+)
AMCG00018712 NA other downstream 299476 18827597 ~ 18840095 (+)
AMCG00018717 trpv4,LOC106585668 other downstream 366214 18894335 ~ 18908956 (+)
AMCG00018732 NA other downstream 695047 19223168 ~ 19234351 (+)
AMCG00018740 NA other downstream 845351 19373472 ~ 19482092 (+)

Expression


Co-expression Network