AMCG00018698


Basic Information

Item Value
gene id AMCG00018698
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 18345957 ~ 18437784 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018698
ATGGACACGAAGCGGAGGATGATGAGGAGCCAGCAGCACCTGAGAATAAAGAAGGAGCTGCACGAGAAAAAGGACACCTACTTTGCTATCCTAGCTGATGAGTGTAAGGACATTTCAAAACGAGAGCTGGTAGCGCTGGTCTGTCTACGTTATATTTATAATGGGGAGATCAAAGAGAGGGCTATTGGCTTCCTGGAGACTGCTGACATGACAGCGGAGGGCAttgcagaaaaaataacagaGATTGTTAACCCTTTTGAACTAGACCCTGAATTATGCGTTGGTCTCAGCTTTGATGGGGTGTCGGTCATGTCTGGGCAGAAGGGGGGAGTTCAAGCCATCCTAAGACACAAATTCATTAATGCCATGTACGTCCACTGTCACTCGCATCTCTTAAACCTGGTGCTATCACCAGCTGTGGCACGGACGTCAGCTGACGCCGCTGCTTTTCTGACACTCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018698 True 462 mRNA 0.48 2 18345957 18437784

Neighbor

gene id symbol gene type direction distance location
AMCG00018686 NA coding upstream 206416 18138045 ~ 18139541 (+)
AMCG00018685 prodha,LOC100695866,LOC108439536,LOC107373658,LOC106514456 coding upstream 310329 18023027 ~ 18035628 (+)
AMCG00018678 LOC104923679,LOC100329495,LOC107386260,LOC102231850,LOC107599169 coding upstream 386432 17933745 ~ 17959525 (+)
AMCG00018679 nf2,nf2a,LOC108431713,LOC107726729,LOC107599150 coding upstream 478972 17840752 ~ 17866985 (+)
AMCG00018668 NA coding upstream 522357 17807007 ~ 17823600 (+)
AMCG00018697 NA coding downstream 89959 18527743 ~ 18528121 (+)
AMCG00018693 NA coding downstream 124749 18562533 ~ 18571339 (+)
AMCG00018691 LOC103397299,LOC106580116,LOC107704964 coding downstream 153182 18590966 ~ 18605862 (+)
AMCG00018692 lztr1,LOC107755835,LOC107704547,LOC107668721 coding downstream 208735 18646519 ~ 18659398 (+)
AMCG00018701 NA coding downstream 247355 18685139 ~ 18690239 (+)
G118005 LOC101154678 non-coding upstream 127858 18217803 ~ 18218099 (+)
G117959 NA non-coding upstream 365018 17979011 ~ 17980939 (+)
G117887 NA non-coding upstream 760845 17584751 ~ 17585112 (+)
G117813 NA non-coding upstream 1092934 17250869 ~ 17253023 (+)
G117808 znrf3,LOC106584905 non-coding upstream 1121348 17224012 ~ 17224609 (+)
G118013 NA non-coding downstream 28584 18466368 ~ 18730812 (+)
G118043 LOC104945943 non-coding downstream 236490 18674274 ~ 18676226 (+)
G118285 NA non-coding downstream 1018358 19456142 ~ 19456983 (+)
G118290 wscd2,LOC107597274,LOC107743343,LOC107696066 non-coding downstream 1030039 19467823 ~ 19473460 (+)
G118291 NA non-coding downstream 1041907 19479691 ~ 19479956 (+)
AMCG00018681 NA other upstream 362940 17981140 ~ 17983017 (+)
G117786 LOC101064881,LOC103134930,LOC106938822,LOC106933658,LOC103469853,LOC105937727 other upstream 1276287 17068212 ~ 17069670 (+)
AMCG00018602 LOC102789415 other upstream 3364252 14954564 ~ 14981705 (+)
G117383 NA other upstream 3557824 14786623 ~ 14788133 (+)
G117379 rplp0,LOC107701857,LOC107654305,LOC107591459 other upstream 3568847 14774115 ~ 14777110 (+)
AMCG00018702 NA other downstream 281422 18719206 ~ 18721343 (+)
AMCG00018712 NA other downstream 389813 18827597 ~ 18840095 (+)
AMCG00018717 trpv4,LOC106585668 other downstream 456551 18894335 ~ 18908956 (+)
AMCG00018732 NA other downstream 785384 19223168 ~ 19234351 (+)
AMCG00018740 NA other downstream 935688 19373472 ~ 19482092 (+)

Expression


Co-expression Network