AMCG00018745


Basic Information

Item Value
gene id AMCG00018745
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 19676622 ~ 19677939 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018745
ATGGAAGTCGGGAAGTCAACGAAGAAGAAGTTCTCATTCACCATCGAAGACATTCTCGCCAAGCTCCCAGAGGGTGATGAAGACAGGGAGGCCCCCGGTGTCCCTCTGTCCCTTGTGTGCATGTCTGGGGAACAATCCAAGGAAGACGTGGTCCTCAAGGTCGGTCCTGTGCCATCTCCAGAACCTCAGGACAACCCttgttactgctgctgctgctgcatccACTGTAGTGACATGCGCGTCCCAGAATACCCACCAGTGACCAGTTGCCAGGTGCTGTGGTCCAGAAGACTCTTCTCTGACCCAGACCAAGGTGGAGACCCCCGCTCCCCCAGTCACATCGAGGAGATCTTCTTCAGCCAGATCCAGAGGCGGACGCGGCGCCACCGGACCATCTTCACCGAGGAGCAGCTGGAAGCGCTGGAGGACCTGTTCCGGCAGAACCAGTACCCTGACGTCACCACCAGGGAACAGCTGGCAGTGCGCACCCACCTGCGAGAGGAGAGGGTGGAGgTGTGGTTTAAGAATCGGAGGGCCAAGTGGAGGAGACAAAAAAGGGTGACTTTGGCTCCGGGCGACCCAGAACAATGGAAGATAATGGAAGATTGA

Function

GO: NA

KEGG:

id description
K09325 GSCL; homeobox protein goosecoid-like

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018745 True 609 mRNA 0.57 3 19676622 19677939

Neighbor

gene id symbol gene type direction distance location
AMCG00018746 NA coding upstream 39888 19612625 ~ 19636734 (+)
AMCG00018743 rnf185,LOC102783490 coding upstream 64481 19606022 ~ 19612141 (+)
AMCG00018736 sart3 coding upstream 330864 19332490 ~ 19345758 (+)
AMCG00018739 NA coding upstream 348743 19326479 ~ 19327879 (+)
AMCG00018735 NA coding upstream 369882 19299948 ~ 19306740 (+)
AMCG00018744 NA coding downstream 832 19678771 ~ 19684562 (+)
AMCG00018754 dgcr2 coding downstream 9645 19687584 ~ 19701791 (+)
AMCG00018751 NA coding downstream 28636 19706575 ~ 19713962 (+)
AMCG00018757 NA coding downstream 51876 19729815 ~ 19732775 (+)
AMCG00018752 NA coding downstream 73675 19751614 ~ 19771954 (+)
G118304 NA non-coding upstream 97591 19576964 ~ 19579031 (+)
G118291 NA non-coding upstream 196666 19479691 ~ 19479956 (+)
G118290 wscd2,LOC107597274,LOC107743343,LOC107696066 non-coding upstream 203162 19467823 ~ 19473460 (+)
G118285 NA non-coding upstream 219639 19456142 ~ 19456983 (+)
G118043 LOC104945943 non-coding upstream 1000396 18674274 ~ 18676226 (+)
G118410 NA non-coding downstream 316187 19994126 ~ 19994329 (+)
G118566 NA non-coding downstream 601349 20279288 ~ 20299830 (+)
G118572 NA non-coding downstream 624731 20302670 ~ 20302958 (+)
G118601 NA non-coding downstream 699349 20377288 ~ 20381442 (+)
G118608 NA non-coding downstream 761021 20438960 ~ 20443229 (+)
AMCG00018740 NA other upstream 194530 19373472 ~ 19482092 (+)
AMCG00018732 NA other upstream 442271 19223168 ~ 19234351 (+)
AMCG00018717 trpv4,LOC106585668 other upstream 767666 18894335 ~ 18908956 (+)
AMCG00018712 NA other upstream 836527 18827597 ~ 18840095 (+)
AMCG00018702 NA other upstream 955279 18719206 ~ 18721343 (+)
AMCG00018762 NA other downstream 293200 19971139 ~ 19974730 (+)
G118557 NA other downstream 581438 20259377 ~ 20260940 (+)
AMCG00018781 denr other downstream 694280 20372219 ~ 20374812 (+)
G118623 NA other downstream 836221 20514160 ~ 20514491 (+)
G118635 NA other downstream 914797 20592736 ~ 20593016 (+)

Expression


Co-expression Network