AMCG00018823


Basic Information

Item Value
gene id AMCG00018823
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 21691311 ~ 21692108 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018823
ATGCACAATTGCATCGTCAAGCTGTTGAAGAACCACAAAGAGTCCCTGTGCCAACTCTTCTCCACTATCGGCAAAGAACTGGACTTGGAGACAGCCAAAGCAAGGCAGTACTTCAACCAGATGGAGCAGATCATCAAAGAGAGGAAGACCTCCTCTCGAATCCGCTTCATGCTGCAGGACGTCTTGGACCTGAGAAGAGATAACTGGGTGCCCAGGAGGGCTGACCAGGGTCCTAAGACAATCAACCAGGTCCACAGGGAAGCAGAGCTGGAGGCGCACTGTGAGCAGATCAAGGTGCAGCAGCAGCTCATGATCAAGAAGGACAACCAACGTGAAAAGAATTCCAGCGACAGTGTCCTGTCACTCGTCGGTCGggccagagcagagcaggcCAGGAAGAGACAGCCTTTTGTAAAAACACTAGAAATAGAAGCACCTGTCCTTCTCTGGCAAAGATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018823 True 459 mRNA 0.52 3 21691311 21692108

Neighbor

gene id symbol gene type direction distance location
AMCG00018806 rflna,LOC106585519 coding upstream 779234 20896914 ~ 20912077 (+)
AMCG00018801 atp6v0a2,LOC106580324,LOC106584979 coding upstream 968197 20706497 ~ 20723114 (+)
AMCG00018803 NA coding upstream 985358 20698222 ~ 20705953 (+)
AMCG00018804 NA coding upstream 993419 20695682 ~ 20697892 (+)
AMCG00018799 tmed2,LOC105026094,LOC108425203 coding upstream 1012490 20670836 ~ 20678821 (+)
AMCG00018821 NA coding downstream 23742 21715850 ~ 21743739 (+)
AMCG00018826 NA coding downstream 338092 22030200 ~ 22036605 (+)
AMCG00018825 NA coding downstream 355194 22047302 ~ 22074621 (+)
AMCG00018828 NA coding downstream 398595 22090703 ~ 22091323 (+)
AMCG00018829 NA coding downstream 399238 22091346 ~ 22091618 (+)
G118885 NA non-coding upstream 9588 21681320 ~ 21681723 (+)
G118863 NA non-coding upstream 268541 21370910 ~ 21422770 (+)
G118771 NA non-coding upstream 759907 20922368 ~ 20931404 (+)
G118644 NA non-coding upstream 1070764 20607648 ~ 20620547 (+)
G118645 NA non-coding upstream 1085214 20604704 ~ 20606097 (+)
G118999 NA non-coding downstream 855164 22547272 ~ 22547691 (+)
G119005 NA non-coding downstream 866105 22558213 ~ 22558419 (+)
G119006 NA non-coding downstream 868954 22561062 ~ 22561280 (+)
G119007 NA non-coding downstream 870444 22562552 ~ 22562810 (+)
G119008 NA non-coding downstream 872262 22564370 ~ 22564707 (+)
G118815 NA other upstream 502065 21187956 ~ 21189246 (+)
AMCG00018802 dnah10,LOC102798403,LOC105907537,LOC105907538 other upstream 918725 20723610 ~ 20772586 (+)
AMCG00018800 ddx55,gtf2h3,eif2b1 other upstream 996117 20679280 ~ 20695194 (+)
AMCG00018792 LOC106928543 other upstream 1087996 20601956 ~ 20603315 (+)
G118636 NA other upstream 1097172 20593366 ~ 20594139 (+)
AMCG00018820 NA other downstream 156262 21848370 ~ 21897700 (+)
G119507 NA other downstream 3541974 25234082 ~ 25267781 (+)
AMCG00018913 NA other downstream 3773983 25466091 ~ 25485446 (+)
AMCG00018922 med13l other downstream 3986569 25678677 ~ 25718426 (+)
G119762 NA other downstream 4768512 26460620 ~ 26461227 (+)

Expression


Co-expression Network