G115789


Basic Information

Item Value
gene id G115789
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 8693364 ~ 8694719 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU145016
AATAATTTACGATCGACTACTGCACATTAAAGTATATTTCTTGCACAAGCACATTCCAATCTAACAAGTTAGAGGGAGTCCATGCTtctgcaatataaaatacattttacaacttggATTTTACAGAACAGGAAACTAACAAATAGTTAAATGgacaacatttatttgcatCTTTCAATGGatagcttttttttctccttaaccctgctgtggtaccatggggtctctgtgaccccaccccaatggtaCTGTCAATGTCACTTTTTTCATGGTTCCAGAGCAGGGTTAAACAAGTAGAAATGTTAGTCAAATCCTGAATCAAAGCTGGTACTGCCTAGTGAGAGATGGTATCAGCTCTGCCTATGAAGGTTTCTAACTGCACAACCTTCCCagccacagttaacagtgcattaGTAGACCGGTACATAACTCTTATCTAAACACCTTCCTAGAGCAGAGCACATTTTCAGTTGCTATAGGAACTCAAACTAGTcatgtacaaaaacaagaatacatCAGGCTTAACTGTTACTAAAACATTACCGTATCGTTTATGCAAGAATGAAGAATCTTGGATATATAAAAGGGTTTATTTCTTTCGAGTCCTGCATATTTCAGGTGCCGTCCCCTGCTTTACAATTTCTAAAGCACACGGCCCTGCTCTCCTGTGCTTTGCCTGTCAAATCATCATGTTGCTAAATGCAAGAGGGGAGGTTGCTTGTGTACAgaggtttgcattttttaaaacctcCTTCCTCAGCCCTTATCCCAGCTGGGTTAGGAGTTCATGGGAAGCCTGTCGGTAATATTAACACGACTGGGGGATTTTTCTCTTCAGTCTCTGCGCAGGAGTTTTGGGTGCTTTCTTGGCGGACTTGGCCAGTGTGGTTTTTGCCAGGGCTCCCTTCTTTTTCCTCGCGGGTGTCTTGACAGTTGTTGCCTCCTCTGCCAGAGCTTTCTTTGGAGTCTTCACGGTTTTCGCTTTCTTGCCTGGTGTCCTCAGCACCCTGCCCTCCTTGGGGGTCTCGGGAGGGGCCCCTGCAGACAACCGGGCACTCTTATTTCTAACTGGAGTCTTTGGTGCACTCTCAAATGCTTTCTTTGCTGGGGTCTGAAGCTTGGCCTTCTTGGAGGGCGTTTGTATAGTAACCAACTGTGGAACCTCCTCCACTTCCTGTCCAGGCTCTGCCTTTGCAACCTTTCCCTTTTTGCCCTTCTGCTTGCCTACCTTCTTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU145016 True 1236 TUCP 0.45 2 8693364 8694719

Neighbor

gene id symbol gene type direction distance location
AMCG00018338 NA coding upstream 26705 8650411 ~ 8666659 (+)
AMCG00018337 NA coding upstream 47256 8643855 ~ 8646108 (+)
AMCG00018335 NA coding upstream 69710 8604721 ~ 8623654 (+)
AMCG00018336 myh11,LOC103025732 coding upstream 100643 8553588 ~ 8592721 (+)
AMCG00018333 cp063,fopnl,LOC106564614 coding upstream 150249 8541991 ~ 8543115 (+)
AMCG00018345 snx29,LOC107554010 coding downstream 24021 8718740 ~ 8731928 (+)
AMCG00018349 NA coding downstream 88910 8783629 ~ 8810474 (+)
AMCG00018348 snx29,LOC107554039 coding downstream 118300 8813019 ~ 8847184 (+)
AMCG00018350 NA coding downstream 237371 8932090 ~ 8937602 (+)
AMCG00018351 NA coding downstream 242896 8937615 ~ 8941636 (+)
G115678 NA non-coding upstream 320537 8352077 ~ 8372827 (+)
G115679 NA non-coding upstream 345528 8294416 ~ 8347836 (+)
G115640 NA non-coding upstream 598915 8094200 ~ 8094449 (+)
G115591 NA non-coding upstream 795184 7897940 ~ 7898180 (+)
G115585 NA non-coding upstream 802463 7883205 ~ 7890901 (+)
G115796 NA non-coding downstream 8438 8703157 ~ 8704903 (+)
G115873 NA non-coding downstream 167362 8862081 ~ 8862511 (+)
G115875 NA non-coding downstream 173823 8868542 ~ 8870342 (+)
G115896 NA non-coding downstream 341611 9036330 ~ 9036583 (+)
G115931 NA non-coding downstream 504158 9198877 ~ 9199440 (+)
G115648 NA other upstream 571193 8119778 ~ 8122171 (+)
G115590 fbxl16,LOC107685932,LOC107568165,LOC107738613,LOC107568127,LOC107690242 other upstream 798915 7893627 ~ 7894449 (+)
AMCG00018280 NA other upstream 1945926 6710482 ~ 6747438 (+)
AMCG00018272 NA other upstream 2532748 6155488 ~ 6160616 (+)
G115299 NA other upstream 2742347 5949463 ~ 5951017 (+)
AMCG00018358 polr3k,rpc11 other downstream 504938 9199657 ~ 9206776 (+)
AMCG00018360 f100a other downstream 545092 9239811 ~ 9245234 (+)
AMCG00018368 NA other downstream 744938 9439657 ~ 9447144 (+)
AMCG00018369 NA other downstream 786233 9480952 ~ 9486146 (+)
AMCG00018374 NA other downstream 817595 9512314 ~ 9513236 (+)

Expression


Co-expression Network