G115873


Basic Information

Item Value
gene id G115873
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 8862081 ~ 8862511 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU145109
gcaggtcgttccaccatttaggggccagggatgagaaggagcggctctggaggaaggagagtggagaggaggcagagttagtcttctggcactggaggagcgcagtggtctggaggggatgtatggagagacgagtgactgaaggtagcttggtgcagtgtggtcaagacagcggtaggtgagggtcaaagtcttgaactgaatgcgtgccactatcaggagccagtggagggagcggagcagtggagtagcgtgtaaatcgtggcagagagaataccagatgagccgcagagttctggatgagcaggagcggcgggtagtagatgcaggcaggctggccaggagggagttgcagtagtccaggcgggagaggaccagggactggacgagtagctgagtcgagtagtcggtgaggaagggacggatccggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU145109 True 431 lncRNA 0.59 1 8862081 8862511

Neighbor

gene id symbol gene type direction distance location
AMCG00018348 snx29,LOC107554039 coding upstream 14897 8813019 ~ 8847184 (+)
AMCG00018349 NA coding upstream 51607 8783629 ~ 8810474 (+)
AMCG00018345 snx29,LOC107554010 coding upstream 130153 8718740 ~ 8731928 (+)
AMCG00018338 NA coding upstream 195422 8650411 ~ 8666659 (+)
AMCG00018337 NA coding upstream 215973 8643855 ~ 8646108 (+)
AMCG00018350 NA coding downstream 69579 8932090 ~ 8937602 (+)
AMCG00018351 NA coding downstream 75104 8937615 ~ 8941636 (+)
AMCG00018354 NA coding downstream 157492 9020003 ~ 9021898 (+)
AMCG00018356 NA coding downstream 261802 9124313 ~ 9130120 (+)
AMCG00018357 NA coding downstream 293670 9156181 ~ 9156453 (+)
G115796 NA non-coding upstream 157178 8703157 ~ 8704903 (+)
G115678 NA non-coding upstream 489254 8352077 ~ 8372827 (+)
G115679 NA non-coding upstream 514245 8294416 ~ 8347836 (+)
G115640 NA non-coding upstream 767632 8094200 ~ 8094449 (+)
G115591 NA non-coding upstream 963901 7897940 ~ 7898180 (+)
G115875 NA non-coding downstream 6031 8868542 ~ 8870342 (+)
G115896 NA non-coding downstream 173819 9036330 ~ 9036583 (+)
G115931 NA non-coding downstream 336366 9198877 ~ 9199440 (+)
G115939 NA non-coding downstream 365499 9228010 ~ 9230141 (+)
G115990 NA non-coding downstream 574521 9437032 ~ 9437303 (+)
G115789 NA other upstream 167362 8693364 ~ 8694719 (+)
G115648 NA other upstream 739910 8119778 ~ 8122171 (+)
G115590 fbxl16,LOC107685932,LOC107568165,LOC107738613,LOC107568127,LOC107690242 other upstream 967632 7893627 ~ 7894449 (+)
AMCG00018280 NA other upstream 2114643 6710482 ~ 6747438 (+)
AMCG00018272 NA other upstream 2701465 6155488 ~ 6160616 (+)
AMCG00018358 polr3k,rpc11 other downstream 337146 9199657 ~ 9206776 (+)
AMCG00018360 f100a other downstream 377300 9239811 ~ 9245234 (+)
AMCG00018368 NA other downstream 577146 9439657 ~ 9447144 (+)
AMCG00018369 NA other downstream 618441 9480952 ~ 9486146 (+)
AMCG00018374 NA other downstream 649803 9512314 ~ 9513236 (+)

Expression


Co-expression Network