G115896


Basic Information

Item Value
gene id G115896
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 9036330 ~ 9036583 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU145137
ccgtctcatcaggagcatgcccagacattgtcgggagtgcatacaggcacgtgggggccatacacactactgagtcacattatgagttgccgtgatgaaattcacacaagttggaacagcctgtgatttcaattgtttactttgattttcggtgtgagtttgaatccagccctcaatcggttggtgattttggtttccattgaccgttgttacgtcattttgttctcaacgaattacacaatgtacagtaaaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU145137 True 254 lncRNA 0.44 1 9036330 9036583

Neighbor

gene id symbol gene type direction distance location
AMCG00018354 NA coding upstream 14432 9020003 ~ 9021898 (+)
AMCG00018351 NA coding upstream 94694 8937615 ~ 8941636 (+)
AMCG00018350 NA coding upstream 98728 8932090 ~ 8937602 (+)
AMCG00018348 snx29,LOC107554039 coding upstream 189146 8813019 ~ 8847184 (+)
AMCG00018349 NA coding upstream 225856 8783629 ~ 8810474 (+)
AMCG00018356 NA coding downstream 87730 9124313 ~ 9130120 (+)
AMCG00018357 NA coding downstream 119598 9156181 ~ 9156453 (+)
AMCG00018355 NA coding downstream 125903 9162486 ~ 9187759 (+)
AMCG00018359 mgrn1 coding downstream 222871 9259454 ~ 9285418 (+)
AMCG00018366 NA coding downstream 254749 9291332 ~ 9295905 (+)
G115875 NA non-coding upstream 165988 8868542 ~ 8870342 (+)
G115873 NA non-coding upstream 173819 8862081 ~ 8862511 (+)
G115796 NA non-coding upstream 331427 8703157 ~ 8704903 (+)
G115678 NA non-coding upstream 663503 8352077 ~ 8372827 (+)
G115679 NA non-coding upstream 688494 8294416 ~ 8347836 (+)
G115931 NA non-coding downstream 162294 9198877 ~ 9199440 (+)
G115939 NA non-coding downstream 191427 9228010 ~ 9230141 (+)
G115990 NA non-coding downstream 400449 9437032 ~ 9437303 (+)
G116002 NA non-coding downstream 435914 9472497 ~ 9477108 (+)
G116011 NA non-coding downstream 490899 9527482 ~ 9527757 (+)
G115789 NA other upstream 341611 8693364 ~ 8694719 (+)
G115648 NA other upstream 914159 8119778 ~ 8122171 (+)
G115590 fbxl16,LOC107685932,LOC107568165,LOC107738613,LOC107568127,LOC107690242 other upstream 1141881 7893627 ~ 7894449 (+)
AMCG00018280 NA other upstream 2288892 6710482 ~ 6747438 (+)
AMCG00018272 NA other upstream 2875714 6155488 ~ 6160616 (+)
AMCG00018358 polr3k,rpc11 other downstream 163074 9199657 ~ 9206776 (+)
AMCG00018360 f100a other downstream 203228 9239811 ~ 9245234 (+)
AMCG00018368 NA other downstream 403074 9439657 ~ 9447144 (+)
AMCG00018369 NA other downstream 444369 9480952 ~ 9486146 (+)
AMCG00018374 NA other downstream 475731 9512314 ~ 9513236 (+)

Expression


Co-expression Network