G116011


Basic Information

Item Value
gene id G116011
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 9527482 ~ 9527757 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU145288
gtttgatgtggtcgatgcctttcatgattttgaagacttgaatcaagtccccacgtagtctcctctgttccagggtgaacaggttcagttcctcagtctctcagtaggacgttcccttcagacctggaataagtctggttgctctcctctgaactgcctctagagcagcgatatctttcttgaagtgtggagcccagaactgtccacagtatccagatgagctctaactagcgcattgtacagtctgaacatcactgcccttgttctcaattctac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU145288 True 276 lncRNA 0.47 1 9527482 9527757

Neighbor

gene id symbol gene type direction distance location
AMCG00018373 NA coding upstream 6495 9519667 ~ 9520987 (+)
AMCG00018365 aanat2,LOC107672440,LOC107670449,LOC107596820,LOC106934031 coding upstream 167796 9354703 ~ 9359686 (+)
AMCG00018366 NA coding upstream 231577 9291332 ~ 9295905 (+)
AMCG00018359 mgrn1 coding upstream 242064 9259454 ~ 9285418 (+)
AMCG00018355 NA coding upstream 339723 9162486 ~ 9187759 (+)
AMCG00018371 NA coding downstream 17784 9545541 ~ 9561135 (+)
AMCG00018383 NA coding downstream 147931 9675688 ~ 9685520 (+)
AMCG00018395 NA coding downstream 163069 9690826 ~ 9691578 (+)
AMCG00018385 NA coding downstream 181222 9708979 ~ 9711300 (+)
AMCG00018384 NA coding downstream 198025 9725782 ~ 9729487 (+)
G116002 NA non-coding upstream 50374 9472497 ~ 9477108 (+)
G115990 NA non-coding upstream 90179 9437032 ~ 9437303 (+)
G115939 NA non-coding upstream 297341 9228010 ~ 9230141 (+)
G115931 NA non-coding upstream 328042 9198877 ~ 9199440 (+)
G115896 NA non-coding upstream 490899 9036330 ~ 9036583 (+)
G116019 NA non-coding downstream 36969 9564726 ~ 9566691 (+)
G116020 NA non-coding downstream 40707 9568464 ~ 9569497 (+)
G116021 NA non-coding downstream 42470 9570227 ~ 9570461 (+)
G116022 NA non-coding downstream 43493 9571250 ~ 9571501 (+)
G116024 NA non-coding downstream 46225 9573982 ~ 9575102 (+)
AMCG00018374 NA other upstream 14246 9512314 ~ 9513236 (+)
AMCG00018369 NA other upstream 41336 9480952 ~ 9486146 (+)
AMCG00018368 NA other upstream 80338 9439657 ~ 9447144 (+)
AMCG00018360 f100a other upstream 282248 9239811 ~ 9245234 (+)
AMCG00018358 polr3k,rpc11 other upstream 320706 9199657 ~ 9206776 (+)
AMCG00018372 LOC106517353,LOC107388090,LOC103381742,LOC101078739,LOC103481046,LOC108270924,LOC108413555 other downstream 34304 9562061 ~ 9564564 (+)
AMCG00018380 NA other downstream 78904 9606661 ~ 9612918 (+)
AMCG00018405 NA other downstream 476516 10004273 ~ 10012673 (+)
AMCG00018406 NA other downstream 516695 10044452 ~ 10046523 (+)
AMCG00018422 NA other downstream 730048 10257805 ~ 10292261 (+)

Expression


Co-expression Network