G116027


Basic Information

Item Value
gene id G116027
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 9577396 ~ 9577600 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU145304
GCCCTTGCCTGAAACAGCTCTCCCAGCATACATCACACCTCTGAGTCTTACCAATTTCTGGGGCGTGCTTGCCTGCCTCTCACAGGGCAGGGGcttgttctctctctgcacCGCCTCTATGACTGCTTCGGCCGCCTCCTCTGGGTCTCTGTCCATCTGAGCAGCTTTCCTGGCAGCTGACAGGGGCCTCTCCCCACGGCCACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU145304 True 205 lncRNA 0.60 1 9577396 9577600

Neighbor

gene id symbol gene type direction distance location
AMCG00018371 NA coding upstream 16261 9545541 ~ 9561135 (+)
AMCG00018373 NA coding upstream 56409 9519667 ~ 9520987 (+)
AMCG00018365 aanat2,LOC107672440,LOC107670449,LOC107596820,LOC106934031 coding upstream 217710 9354703 ~ 9359686 (+)
AMCG00018366 NA coding upstream 281491 9291332 ~ 9295905 (+)
AMCG00018359 mgrn1 coding upstream 291978 9259454 ~ 9285418 (+)
AMCG00018383 NA coding downstream 98088 9675688 ~ 9685520 (+)
AMCG00018395 NA coding downstream 113226 9690826 ~ 9691578 (+)
AMCG00018385 NA coding downstream 131379 9708979 ~ 9711300 (+)
AMCG00018384 NA coding downstream 148182 9725782 ~ 9729487 (+)
AMCG00018388 NA coding downstream 156611 9734211 ~ 9740498 (+)
G116026 NA non-coding upstream 205 9576990 ~ 9577191 (+)
G116024 NA non-coding upstream 2294 9573982 ~ 9575102 (+)
G116022 NA non-coding upstream 5895 9571250 ~ 9571501 (+)
G116021 NA non-coding upstream 6935 9570227 ~ 9570461 (+)
G116020 NA non-coding upstream 7899 9568464 ~ 9569497 (+)
G116028 NA non-coding downstream 1237 9578837 ~ 9579097 (+)
G116034 dnah3,LOC108263105 non-coding downstream 35382 9612982 ~ 9613781 (+)
G116035 dnah3,LOC107561106 non-coding downstream 41070 9618670 ~ 9618905 (+)
G116088 NA non-coding downstream 112165 9689765 ~ 9747387 (+)
G116199 NA non-coding downstream 454953 10032553 ~ 10041833 (+)
AMCG00018372 LOC106517353,LOC107388090,LOC103381742,LOC101078739,LOC103481046,LOC108270924,LOC108413555 other upstream 12832 9562061 ~ 9564564 (+)
AMCG00018374 NA other upstream 64160 9512314 ~ 9513236 (+)
AMCG00018369 NA other upstream 91250 9480952 ~ 9486146 (+)
AMCG00018368 NA other upstream 130252 9439657 ~ 9447144 (+)
AMCG00018360 f100a other upstream 332162 9239811 ~ 9245234 (+)
AMCG00018380 NA other downstream 29061 9606661 ~ 9612918 (+)
AMCG00018405 NA other downstream 426673 10004273 ~ 10012673 (+)
AMCG00018406 NA other downstream 466852 10044452 ~ 10046523 (+)
AMCG00018422 NA other downstream 680205 10257805 ~ 10292261 (+)
AMCG00018449 msrb1,LOC107376545,LOC105933050 other downstream 1674759 11252359 ~ 11256165 (+)

Expression


Co-expression Network