G116035 (dnah3,LOC107561106)


Basic Information

Item Value
gene id G116035
gene name dnah3,LOC107561106
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 9618670 ~ 9618905 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU145317
AAGGGCCCGAAGTTCCGTCTCTCCTGGACAAGTGCGTGGAAGAAGCACAGGCCGAATAGCAGCTTCTGCCAGACCTCCTGCTTCTGGCAGTTGCTGAAGAAGCTGGGGTCGGAGATggggtcgttgaggtaggagcgCAGCAGGTTGGCACGCAGGCCCTTTGGGGGCTCGTTTGTCATCTTCACCCCGTTTTGCAGGATACTGACTGGGAACTTGTCCGATGGGTAGCTGGTCAA

Function

symbol description
dnah3 Predicted to enable dynein intermediate chain binding activity; dynein light intermediate chain binding activity; and minus-end-directed microtubule motor activity. Predicted to be involved in cilium movement. Predicted to be located in cilium; cytoplasm; and microtubule. Predicted to be part of inner dynein arm. Orthologous to human DNAH3 (dynein axonemal heavy chain 3).

NR:

description
PREDICTED: LOW QUALITY PROTEIN: dynein heavy chain 3, axonemal, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU145317 True 236 lncRNA 0.58 1 9618670 9618905

Neighbor

gene id symbol gene type direction distance location
AMCG00018371 NA coding upstream 57535 9545541 ~ 9561135 (+)
AMCG00018373 NA coding upstream 97683 9519667 ~ 9520987 (+)
AMCG00018365 aanat2,LOC107672440,LOC107670449,LOC107596820,LOC106934031 coding upstream 258984 9354703 ~ 9359686 (+)
AMCG00018366 NA coding upstream 322765 9291332 ~ 9295905 (+)
AMCG00018359 mgrn1 coding upstream 333252 9259454 ~ 9285418 (+)
AMCG00018383 NA coding downstream 56783 9675688 ~ 9685520 (+)
AMCG00018395 NA coding downstream 71921 9690826 ~ 9691578 (+)
AMCG00018385 NA coding downstream 90074 9708979 ~ 9711300 (+)
AMCG00018384 NA coding downstream 106877 9725782 ~ 9729487 (+)
AMCG00018388 NA coding downstream 115306 9734211 ~ 9740498 (+)
G116034 dnah3,LOC108263105 non-coding upstream 4889 9612982 ~ 9613781 (+)
G116028 NA non-coding upstream 39573 9578837 ~ 9579097 (+)
G116027 NA non-coding upstream 41070 9577396 ~ 9577600 (+)
G116026 NA non-coding upstream 41479 9576990 ~ 9577191 (+)
G116024 NA non-coding upstream 43568 9573982 ~ 9575102 (+)
G116088 NA non-coding downstream 70860 9689765 ~ 9747387 (+)
G116199 NA non-coding downstream 413648 10032553 ~ 10041833 (+)
G116214 NA non-coding downstream 501272 10120177 ~ 10121558 (+)
G116264 NA non-coding downstream 596482 10215387 ~ 10216789 (+)
G116300 NA non-coding downstream 725830 10344735 ~ 10345082 (+)
AMCG00018380 NA other upstream 5752 9606661 ~ 9612918 (+)
AMCG00018372 LOC106517353,LOC107388090,LOC103381742,LOC101078739,LOC103481046,LOC108270924,LOC108413555 other upstream 54106 9562061 ~ 9564564 (+)
AMCG00018374 NA other upstream 105434 9512314 ~ 9513236 (+)
AMCG00018369 NA other upstream 132524 9480952 ~ 9486146 (+)
AMCG00018368 NA other upstream 171526 9439657 ~ 9447144 (+)
AMCG00018405 NA other downstream 385368 10004273 ~ 10012673 (+)
AMCG00018406 NA other downstream 425547 10044452 ~ 10046523 (+)
AMCG00018422 NA other downstream 638900 10257805 ~ 10292261 (+)
AMCG00018449 msrb1,LOC107376545,LOC105933050 other downstream 1633454 11252359 ~ 11256165 (+)
G116585 rbbp6,LOC107689611 other downstream 2347342 11966247 ~ 11970778 (+)

Expression


Co-expression Network