G116654


Basic Information

Item Value
gene id G116654
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 12278430 ~ 12278840 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU146114
GCTTACCTCACTGGGGTGTTCGTAGGTCTGTTGCAATAAACGCGGCGGCAGGGCTTGTCCCTTttctgggaggaaaaaaaaaatctccctaCCAAATCTCCCAGAGGTAGCCTCAGTAATTTGCTCTGTGTGATTTTATTCTGCAATTGCAGCCTTTACATCCACTGTGTTTTTCGCCCCACGTTTGGTTAAATCggatactaaaataaatacatcaatacaggGATGTGTCCAATTCTCTGCGTATAGAGGCGAGTCCGGCGCAACTGTGTGGCGCAGTGTGAGCTGCCGGGGGTgggtagtagtagtaacagtggCAGTGACTGtggagtggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcttctgaGCTCACAGTGGGAtccacagatgtgtg

Function

NR:

description
PREDICTED: myomesin-3-like

GO: NA

KEGG:

id description
ko05032 Morphine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
TU146114 True 411 lncRNA 0.49 1 12278430 12278840

Neighbor

gene id symbol gene type direction distance location
AMCG00018483 NA coding upstream 7803 12235011 ~ 12270627 (+)
AMCG00018482 plk1,LOC102776063 coding upstream 76334 12195542 ~ 12202096 (+)
AMCG00018481 NA coding upstream 91102 12186690 ~ 12187328 (+)
AMCG00018477 dctn5,LOC107579625,LOC107590401,LOC107719975,LOC105899917 coding upstream 114623 12151389 ~ 12163807 (+)
AMCG00018478 tnrc6a,LOC107601257 coding upstream 161602 12073105 ~ 12116828 (+)
AMCG00018487 traf7,LOC107719978,LOC107601260,LOC107590399 coding downstream 15137 12293977 ~ 12312814 (+)
AMCG00018492 NA coding downstream 251718 12530558 ~ 12539267 (+)
AMCG00018497 epn2,LOC107738009,LOC104959799 coding downstream 340520 12619360 ~ 12648880 (+)
AMCG00018500 NA coding downstream 435267 12714107 ~ 12738068 (+)
AMCG00018501 LOC107376712,LOC106516530,LOC103393184,LOC108242978 coding downstream 505851 12784691 ~ 12819143 (+)
G116653 NA non-coding upstream 4934 12272589 ~ 12273496 (+)
G116603 NA non-coding upstream 136295 12139002 ~ 12142135 (+)
G116601 NA non-coding upstream 151731 12126450 ~ 12126699 (+)
G116546 NA non-coding upstream 460341 11728809 ~ 11818089 (+)
G116479 NA non-coding upstream 862692 11415481 ~ 11415738 (+)
G116667 NA non-coding downstream 8729 12287569 ~ 12319488 (+)
G116725 NA non-coding downstream 421661 12700501 ~ 12700765 (+)
G116728 NA non-coding downstream 600746 12879586 ~ 12883914 (+)
G116765 NA non-coding downstream 626260 12905100 ~ 12958552 (+)
G116769 NA non-coding downstream 654100 12932940 ~ 12934564 (+)
G116585 rbbp6,LOC107689611 other upstream 307652 11966247 ~ 11970778 (+)
AMCG00018449 msrb1,LOC107376545,LOC105933050 other upstream 1022265 11252359 ~ 11256165 (+)
AMCG00018422 NA other upstream 1986169 10257805 ~ 10292261 (+)
AMCG00018406 NA other upstream 2231907 10044452 ~ 10046523 (+)
AMCG00018405 NA other upstream 2265757 10004273 ~ 10012673 (+)
AMCG00018493 prpsap2,LOC107737786,LOC107581734,LOC107720040,LOC107654541 other downstream 210627 12489467 ~ 12500054 (+)
AMCG00018491 slc5a10 other downstream 224183 12503023 ~ 12520331 (+)
AMCG00018498 NA other downstream 264705 12543545 ~ 12611879 (+)
G116832 NA other downstream 974503 13253343 ~ 13255794 (+)
AMCG00018520 slc29a4,LOC107703421,LOC107737679,LOC107581724 other downstream 1029058 13307898 ~ 13346877 (+)

Expression


Co-expression Network