Gene
RNA
| Item | Value |
|---|---|
| gene id | G117388 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030135.1 |
| NCBI id | CM030135.1 |
| chromosome length | 28454832 |
| location | 14793885 ~ 14794239 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU147089 | True | 355 | lncRNA | 0.63 | 1 | 14793885 | 14794239 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00018588 | bicdl1 | coding | upstream | 62221 | 14707571 ~ 14731664 (+) |
| AMCG00018586 | LOC107677981,LOC107567443 | coding | upstream | 147053 | 14630062 ~ 14646832 (+) |
| AMCG00018585 | NA | coding | upstream | 179440 | 14599262 ~ 14614445 (+) |
| AMCG00018577 | NA | coding | upstream | 205857 | 14574260 ~ 14588028 (+) |
| AMCG00018581 | NA | coding | upstream | 236085 | 14554089 ~ 14557800 (+) |
| AMCG00018593 | NA | coding | downstream | 27752 | 14821991 ~ 14824758 (+) |
| AMCG00018600 | NA | coding | downstream | 37261 | 14831500 ~ 14834064 (+) |
| AMCG00018608 | cldn5,LOC103357131 | coding | downstream | 132923 | 14927162 ~ 14927524 (+) |
| AMCG00018603 | ufd1l | coding | downstream | 155397 | 14949636 ~ 14954263 (+) |
| AMCG00018611 | ppil2 | coding | downstream | 636045 | 15430284 ~ 15468382 (+) |
| G117387 | NA | non-coding | upstream | 81 | 14792796 ~ 14793804 (+) |
| G117382 | NA | non-coding | upstream | 7398 | 14786025 ~ 14786487 (+) |
| G117381 | NA | non-coding | upstream | 9552 | 14783506 ~ 14784333 (+) |
| G117353 | NA | non-coding | upstream | 55558 | 14736096 ~ 14738327 (+) |
| G117209 | NA | non-coding | upstream | 259685 | 14533963 ~ 14534200 (+) |
| G117389 | NA | non-coding | downstream | 2292 | 14796531 ~ 14797150 (+) |
| G117380 | NA | non-coding | downstream | 60840 | 14855079 ~ 14899918 (+) |
| G117521 | NA | non-coding | downstream | 698007 | 15492246 ~ 15529341 (+) |
| G117557 | NA | non-coding | downstream | 833100 | 15627339 ~ 15627719 (+) |
| G117574 | NA | non-coding | downstream | 898974 | 15693213 ~ 15695253 (+) |
| G117383 | NA | other | upstream | 5752 | 14786623 ~ 14788133 (+) |
| G117379 | rplp0,LOC107701857,LOC107654305,LOC107591459 | other | upstream | 16775 | 14774115 ~ 14777110 (+) |
| AMCG00018567 | NA | other | upstream | 381606 | 14408958 ~ 14412279 (+) |
| AMCG00018564 | mlec,LOC106579938 | other | upstream | 394346 | 14330841 ~ 14399539 (+) |
| AMCG00018602 | LOC102789415 | other | downstream | 160325 | 14954564 ~ 14981705 (+) |
| G117786 | LOC101064881,LOC103134930,LOC106938822,LOC106933658,LOC103469853,LOC105937727 | other | downstream | 2273973 | 17068212 ~ 17069670 (+) |
| AMCG00018681 | NA | other | downstream | 3186901 | 17981140 ~ 17983017 (+) |
| AMCG00018702 | NA | other | downstream | 3924967 | 18719206 ~ 18721343 (+) |
| AMCG00018712 | NA | other | downstream | 4033358 | 18827597 ~ 18840095 (+) |
