Gene
RNA
| Item | Value |
|---|---|
| gene id | G117768 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030135.1 |
| NCBI id | CM030135.1 |
| chromosome length | 28454832 |
| location | 16748869 ~ 16749971 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0017001 | antibiotic catabolic process | biological_process |
| GO:0019541 | propionate metabolic process | biological_process |
| GO:0019543 | propionate catabolic process | biological_process |
| GO:0019626 | short-chain fatty acid catabolic process | biological_process |
| GO:0046459 | short-chain fatty acid metabolic process | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU147567 | True | 1103 | lncRNA | 0.41 | 1 | 16748869 | 16749971 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00018641 | NA | coding | upstream | 314566 | 16419039 ~ 16434303 (+) |
| AMCG00018636 | pgam5,LOC107089933 | coding | upstream | 370168 | 16373896 ~ 16378701 (+) |
| AMCG00018638 | ranbp1,LOC106580467,LOC107684983 | coding | upstream | 450158 | 16296038 ~ 16298711 (+) |
| AMCG00018637 | NA | coding | upstream | 462206 | 16280833 ~ 16286663 (+) |
| AMCG00018635 | NA | coding | upstream | 470068 | 16256197 ~ 16278801 (+) |
| AMCG00018648 | NA | coding | downstream | 321383 | 17071354 ~ 17090022 (+) |
| AMCG00018647 | LOC106592780 | coding | downstream | 391418 | 17141389 ~ 17149356 (+) |
| AMCG00018654 | NA | coding | downstream | 503184 | 17253155 ~ 17256857 (+) |
| AMCG00018655 | NA | coding | downstream | 540731 | 17290702 ~ 17296987 (+) |
| AMCG00018659 | taok3 | coding | downstream | 796989 | 17546960 ~ 17574431 (+) |
| G117660 | NA | non-coding | upstream | 627424 | 16083353 ~ 16121445 (+) |
| G117573 | NA | non-coding | upstream | 1050004 | 15695426 ~ 15698865 (+) |
| G117574 | NA | non-coding | upstream | 1053616 | 15693213 ~ 15695253 (+) |
| G117557 | NA | non-coding | upstream | 1121150 | 15627339 ~ 15627719 (+) |
| G117521 | NA | non-coding | upstream | 1219528 | 15492246 ~ 15529341 (+) |
| G117783 | NA | non-coding | downstream | 258927 | 17008898 ~ 17009246 (+) |
| G117801 | NA | non-coding | downstream | 403811 | 17153782 ~ 17155824 (+) |
| G117804 | NA | non-coding | downstream | 410791 | 17160762 ~ 17161040 (+) |
| G117805 | NA | non-coding | downstream | 411543 | 17161514 ~ 17161723 (+) |
| G117808 | znrf3,LOC106584905 | non-coding | downstream | 474041 | 17224012 ~ 17224609 (+) |
| AMCG00018602 | LOC102789415 | other | upstream | 1767164 | 14954564 ~ 14981705 (+) |
| G117383 | NA | other | upstream | 1960736 | 14786623 ~ 14788133 (+) |
| G117379 | rplp0,LOC107701857,LOC107654305,LOC107591459 | other | upstream | 1971759 | 14774115 ~ 14777110 (+) |
| AMCG00018567 | NA | other | upstream | 2336590 | 14408958 ~ 14412279 (+) |
| G117178 | NA | other | upstream | 2401128 | 14345090 ~ 14347741 (+) |
| G117786 | LOC101064881,LOC103134930,LOC106938822,LOC106933658,LOC103469853,LOC105937727 | other | downstream | 318241 | 17068212 ~ 17069670 (+) |
| AMCG00018681 | NA | other | downstream | 1231169 | 17981140 ~ 17983017 (+) |
| AMCG00018702 | NA | other | downstream | 1969235 | 18719206 ~ 18721343 (+) |
| AMCG00018712 | NA | other | downstream | 2077626 | 18827597 ~ 18840095 (+) |
| AMCG00018717 | trpv4,LOC106585668 | other | downstream | 2144364 | 18894335 ~ 18908956 (+) |
