G117786 (LOC101064881,LOC103134930,LOC106938822,LOC106933658,LOC103469853,LOC105937727)


Basic Information

Item Value
gene id G117786
gene name LOC101064881,LOC103134930,LOC106938822,LOC106933658,LOC103469853,LOC105937727
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 17068212 ~ 17069670 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU147595
ACTGCTTCCATGCATTACAAATATGCCAGACAGCTGCTGTTGATTAATGAATAGCTCCATTTATTTACAACAACACCTATTGCTTAAGTCTTGTCAGCACATTATCATTAACAACAGgagaattgttttaatgtgtaatgaAGAGTTAGTGATCATTCAGTGGTGTGTGCCAAGTTGCAGGAGTATTCAAGATTTAAGATTAAACAGCAATCGTGTATGGTAgcacattaattaaatgcatcaaattaaaaagaaaataagaataatgtgtaatactgtttttatcAGCATAAAAAGGCATCCCTGTATTATTTATGTGGAATCTTGTTTTATGTATAAGAGGGTTCAacaattattcaatattttcagtGCACCAGCAAGTGTGGTAAAAGACACCCACACCCAGTGAAACCCCCATCCAAAAGGACacaggataaaataaatatataaataaaaacactcaaaaaacaataaataaacacttctgTCAACATTATAAATTCCATCCATTATCATACCATTCATACcaatacattgtataaggaATCCATGTGATTGATTAGCACTTTTTTGCAATTATGCATCAACAATGACTTGAAACTGCAAGAGAGGTGACAGAGATCAAAGACTTGTGTCAATCTGCTGCAAATCAATTATctacatacataaacaatgcatcacaacattttctttttcaaatgcaaacaactataaaaaaaaaagggattcTAACTTCCATCAAGCCAGTTTCACCATCCTTTCACTGGCTTCCCATAACTTCTTAGCGACTCCTGCGTCCTTTGCAAAGGGCCTCAGGGCTGTGTGCTGGCAGTCAATAAAGAACCCCCCACTGTACGGCAGCACGTCATCTGATACGGCACAGTAGATGACAGTCTGCGCACCAACCCTGGATGTATGGCATAGGCAGTCACTCCTTTCCCCTCCATCAGTCTGGACAATTCGTGAGTGAAGTAGATATTTGCCAGCTTACTGCGGCAAAAGGAGAAGAAAGGCACAATGTTATAGTTCAAGTCCTGGAAGTCAAGCTTCTGGTACTTGTAAGCCGTGGAGGTCAGGGTGATGACTCGGCTCGGGGAGCACTCTTTCAACCGGCCGAGCAGGAGATTCGTGAGCAAGAAGTGGCCCAGGTGGTTGACCCCAAAACACATGCTAAAGCCGTCGTCTGTCCAGTCAAGGACACTTGGCATTCC

Function

NR:

description
PREDICTED: glypican-1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU147595 True 1211 TUCP 0.40 2 17068212 17069670

Neighbor

gene id symbol gene type direction distance location
AMCG00018641 NA coding upstream 633909 16419039 ~ 16434303 (+)
AMCG00018636 pgam5,LOC107089933 coding upstream 689511 16373896 ~ 16378701 (+)
AMCG00018638 ranbp1,LOC106580467,LOC107684983 coding upstream 769501 16296038 ~ 16298711 (+)
AMCG00018637 NA coding upstream 781549 16280833 ~ 16286663 (+)
AMCG00018635 NA coding upstream 789411 16256197 ~ 16278801 (+)
AMCG00018648 NA coding downstream 1684 17071354 ~ 17090022 (+)
AMCG00018647 LOC106592780 coding downstream 71719 17141389 ~ 17149356 (+)
AMCG00018654 NA coding downstream 183485 17253155 ~ 17256857 (+)
AMCG00018655 NA coding downstream 221032 17290702 ~ 17296987 (+)
AMCG00018659 taok3 coding downstream 477290 17546960 ~ 17574431 (+)
G117783 NA non-coding upstream 58966 17008898 ~ 17009246 (+)
G117768 NA non-coding upstream 318241 16748869 ~ 16749971 (+)
G117660 NA non-coding upstream 946767 16083353 ~ 16121445 (+)
G117573 NA non-coding upstream 1369347 15695426 ~ 15698865 (+)
G117574 NA non-coding upstream 1372959 15693213 ~ 15695253 (+)
G117801 NA non-coding downstream 84112 17153782 ~ 17155824 (+)
G117804 NA non-coding downstream 91092 17160762 ~ 17161040 (+)
G117805 NA non-coding downstream 91844 17161514 ~ 17161723 (+)
G117808 znrf3,LOC106584905 non-coding downstream 154342 17224012 ~ 17224609 (+)
G117813 NA non-coding downstream 181199 17250869 ~ 17253023 (+)
AMCG00018602 LOC102789415 other upstream 2086507 14954564 ~ 14981705 (+)
G117383 NA other upstream 2280079 14786623 ~ 14788133 (+)
G117379 rplp0,LOC107701857,LOC107654305,LOC107591459 other upstream 2291102 14774115 ~ 14777110 (+)
AMCG00018567 NA other upstream 2655933 14408958 ~ 14412279 (+)
AMCG00018564 mlec,LOC106579938 other upstream 2668673 14330841 ~ 14399539 (+)
AMCG00018681 NA other downstream 911470 17981140 ~ 17983017 (+)
AMCG00018702 NA other downstream 1649536 18719206 ~ 18721343 (+)
AMCG00018712 NA other downstream 1757927 18827597 ~ 18840095 (+)
AMCG00018717 trpv4,LOC106585668 other downstream 1824665 18894335 ~ 18908956 (+)
AMCG00018732 NA other downstream 2153498 19223168 ~ 19234351 (+)

Expression


Co-expression Network