G117804


Basic Information

Item Value
gene id G117804
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 17160762 ~ 17161040 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU147618
TCTCCATCGATGTATTTCTCCAGACAGATGGCACAGTCAGACGTGGAGCTGCTGCTCAGAGAGTCTGACATCCCACAGCCGCCCTCCCGGTGACCTTTACTCTTGGACTTGAATTTCCGCGTTTCCATCTTTTCCAGCGCTTGGATGGCCATCCTGTTCATGGAGCTCTGTCAGGAGACAACATTGAGCAACAGATCAGCAGCATTCTTGAATTAAACAAGATGCATATTGAAGGTTGTGCAACATCACAGAACAATAATGActctaaataatgaaaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU147618 True 279 lncRNA 0.46 1 17160762 17161040

Neighbor

gene id symbol gene type direction distance location
AMCG00018647 LOC106592780 coding upstream 11406 17141389 ~ 17149356 (+)
AMCG00018648 NA coding upstream 70740 17071354 ~ 17090022 (+)
AMCG00018641 NA coding upstream 726459 16419039 ~ 16434303 (+)
AMCG00018636 pgam5,LOC107089933 coding upstream 782061 16373896 ~ 16378701 (+)
AMCG00018638 ranbp1,LOC106580467,LOC107684983 coding upstream 862051 16296038 ~ 16298711 (+)
AMCG00018654 NA coding downstream 92115 17253155 ~ 17256857 (+)
AMCG00018655 NA coding downstream 129662 17290702 ~ 17296987 (+)
AMCG00018659 taok3 coding downstream 385920 17546960 ~ 17574431 (+)
AMCG00018662 NA coding downstream 416895 17577935 ~ 17584564 (+)
AMCG00018663 NA coding downstream 424480 17585520 ~ 17593696 (+)
G117801 NA non-coding upstream 4938 17153782 ~ 17155824 (+)
G117783 NA non-coding upstream 151516 17008898 ~ 17009246 (+)
G117768 NA non-coding upstream 410791 16748869 ~ 16749971 (+)
G117660 NA non-coding upstream 1039317 16083353 ~ 16121445 (+)
G117573 NA non-coding upstream 1461897 15695426 ~ 15698865 (+)
G117805 NA non-coding downstream 474 17161514 ~ 17161723 (+)
G117808 znrf3,LOC106584905 non-coding downstream 62972 17224012 ~ 17224609 (+)
G117813 NA non-coding downstream 89829 17250869 ~ 17253023 (+)
G117887 NA non-coding downstream 423711 17584751 ~ 17585112 (+)
G117959 NA non-coding downstream 817971 17979011 ~ 17980939 (+)
G117786 LOC101064881,LOC103134930,LOC106938822,LOC106933658,LOC103469853,LOC105937727 other upstream 91092 17068212 ~ 17069670 (+)
AMCG00018602 LOC102789415 other upstream 2179057 14954564 ~ 14981705 (+)
G117383 NA other upstream 2372629 14786623 ~ 14788133 (+)
G117379 rplp0,LOC107701857,LOC107654305,LOC107591459 other upstream 2383652 14774115 ~ 14777110 (+)
AMCG00018567 NA other upstream 2748483 14408958 ~ 14412279 (+)
AMCG00018681 NA other downstream 820100 17981140 ~ 17983017 (+)
AMCG00018702 NA other downstream 1558166 18719206 ~ 18721343 (+)
AMCG00018712 NA other downstream 1666557 18827597 ~ 18840095 (+)
AMCG00018717 trpv4,LOC106585668 other downstream 1733295 18894335 ~ 18908956 (+)
AMCG00018732 NA other downstream 2062128 19223168 ~ 19234351 (+)

Expression


Co-expression Network