G118013


Basic Information

Item Value
gene id G118013
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 18466368 ~ 18730812 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU147886
CGCCTCAAGGTTGTACgtgttgtggcttcacaaatgctttgctgcatacctcgTAACTCGTTACCTTGTaacgagtggttatttcagtcaaagttgctcttctatcagcttgaatcagtcggcccattctcctctgacctctagcatcaacaaggcattttcgcccacaggactgccgcatactggatgtttttcccttttcacaccattctttgtaaaccctagaaatggttgtgcgtgaaaatcccagtaactgagcagattgtgaaatactcagaccggccgaccgaccaacaaccatgccacactcaaaattgcttaaatcacctttctttcccattcagacattcagtttggagttcaggagattgtcttgaccaggaccacacccctaaaggcattgaagcaactgccatgtgattggttggttagataattgcattaatgagaaattgaacaggtgttcctaataatcctttgggtgagtgtatatatatatatatataacgagaaatAGATTTGGACAACTCAATATCGCCATCTACCTACTATATTTATTATGTGCTACATGTTTTACTACACTATTTGACTGGGAAAAAAGCTTT

Function

GO: NA

KEGG:

id description
ko05164 Influenza A
ko05162 Measles

RNA

RNA id representative length rna type GC content exon number start site end site
TU147886 True 605 lncRNA 0.41 2 18466368 18730812

Neighbor

gene id symbol gene type direction distance location
AMCG00018698 NA coding upstream 28584 18345957 ~ 18437784 (+)
AMCG00018686 NA coding upstream 326827 18138045 ~ 18139541 (+)
AMCG00018685 prodha,LOC100695866,LOC108439536,LOC107373658,LOC106514456 coding upstream 430740 18023027 ~ 18035628 (+)
AMCG00018678 LOC104923679,LOC100329495,LOC107386260,LOC102231850,LOC107599169 coding upstream 506843 17933745 ~ 17959525 (+)
AMCG00018679 nf2,nf2a,LOC108431713,LOC107726729,LOC107599150 coding upstream 599383 17840752 ~ 17866985 (+)
AMCG00018700 srsf9,LOC106568192,LOC107653776 coding downstream 2295 18733107 ~ 18734584 (+)
AMCG00018711 LOC106580268,LOC105014447,LOC106585675,LOC103353553 coding downstream 78564 18809376 ~ 18821287 (+)
AMCG00018710 git2 coding downstream 115764 18846576 ~ 18869867 (+)
AMCG00018716 gltp,gltpa,LOC107752155,LOC107654619,LOC107741237,LOC107597288,LOC107595968 coding downstream 145958 18876770 ~ 18885979 (+)
AMCG00018720 mmab coding downstream 316976 19047788 ~ 19050639 (+)
G118005 LOC101154678 non-coding upstream 248269 18217803 ~ 18218099 (+)
G117959 NA non-coding upstream 485429 17979011 ~ 17980939 (+)
G117887 NA non-coding upstream 881256 17584751 ~ 17585112 (+)
G117813 NA non-coding upstream 1213345 17250869 ~ 17253023 (+)
G117808 znrf3,LOC106584905 non-coding upstream 1241759 17224012 ~ 17224609 (+)
G118285 NA non-coding downstream 725330 19456142 ~ 19456983 (+)
G118290 wscd2,LOC107597274,LOC107743343,LOC107696066 non-coding downstream 737011 19467823 ~ 19473460 (+)
G118291 NA non-coding downstream 748879 19479691 ~ 19479956 (+)
G118304 NA non-coding downstream 846152 19576964 ~ 19579031 (+)
G118410 NA non-coding downstream 1263314 19994126 ~ 19994329 (+)
AMCG00018681 NA other upstream 483351 17981140 ~ 17983017 (+)
G117786 LOC101064881,LOC103134930,LOC106938822,LOC106933658,LOC103469853,LOC105937727 other upstream 1396698 17068212 ~ 17069670 (+)
AMCG00018602 LOC102789415 other upstream 3484663 14954564 ~ 14981705 (+)
G117383 NA other upstream 3678235 14786623 ~ 14788133 (+)
G117379 rplp0,LOC107701857,LOC107654305,LOC107591459 other upstream 3689258 14774115 ~ 14777110 (+)
AMCG00018712 NA other downstream 96785 18827597 ~ 18840095 (+)
AMCG00018717 trpv4,LOC106585668 other downstream 163523 18894335 ~ 18908956 (+)
AMCG00018732 NA other downstream 492356 19223168 ~ 19234351 (+)
AMCG00018740 NA other downstream 642660 19373472 ~ 19482092 (+)
AMCG00018762 NA other downstream 1240327 19971139 ~ 19974730 (+)

Expression


Co-expression Network