Gene
RNA
| Item | Value |
|---|---|
| gene id | G118291 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030135.1 |
| NCBI id | CM030135.1 |
| chromosome length | 28454832 |
| location | 19479691 ~ 19479956 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: tyrosine-protein kinase fyna-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU148227 | True | 266 | lncRNA | 0.49 | 1 | 19479691 | 19479956 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00018736 | sart3 | coding | upstream | 133933 | 19332490 ~ 19345758 (+) |
| AMCG00018739 | NA | coding | upstream | 151812 | 19326479 ~ 19327879 (+) |
| AMCG00018735 | NA | coding | upstream | 172951 | 19299948 ~ 19306740 (+) |
| AMCG00018734 | NA | coding | upstream | 183690 | 19289189 ~ 19296001 (+) |
| AMCG00018737 | coro1c,LOC106584990 | coding | upstream | 196725 | 19274909 ~ 19282966 (+) |
| AMCG00018743 | rnf185,LOC102783490 | coding | downstream | 126066 | 19606022 ~ 19612141 (+) |
| AMCG00018746 | NA | coding | downstream | 132669 | 19612625 ~ 19636734 (+) |
| AMCG00018745 | NA | coding | downstream | 196666 | 19676622 ~ 19677939 (+) |
| AMCG00018744 | NA | coding | downstream | 198815 | 19678771 ~ 19684562 (+) |
| AMCG00018754 | dgcr2 | coding | downstream | 207628 | 19687584 ~ 19701791 (+) |
| G118290 | wscd2,LOC107597274,LOC107743343,LOC107696066 | non-coding | upstream | 6231 | 19467823 ~ 19473460 (+) |
| G118285 | NA | non-coding | upstream | 22708 | 19456142 ~ 19456983 (+) |
| G118013 | NA | non-coding | upstream | 748879 | 18466368 ~ 18730812 (+) |
| G118043 | LOC104945943 | non-coding | upstream | 803465 | 18674274 ~ 18676226 (+) |
| G118005 | LOC101154678 | non-coding | upstream | 1261592 | 18217803 ~ 18218099 (+) |
| G118304 | NA | non-coding | downstream | 97008 | 19576964 ~ 19579031 (+) |
| G118410 | NA | non-coding | downstream | 514170 | 19994126 ~ 19994329 (+) |
| G118566 | NA | non-coding | downstream | 799332 | 20279288 ~ 20299830 (+) |
| G118572 | NA | non-coding | downstream | 822714 | 20302670 ~ 20302958 (+) |
| G118601 | NA | non-coding | downstream | 897332 | 20377288 ~ 20381442 (+) |
| AMCG00018732 | NA | other | upstream | 245340 | 19223168 ~ 19234351 (+) |
| AMCG00018717 | trpv4,LOC106585668 | other | upstream | 570735 | 18894335 ~ 18908956 (+) |
| AMCG00018712 | NA | other | upstream | 639596 | 18827597 ~ 18840095 (+) |
| AMCG00018702 | NA | other | upstream | 758348 | 18719206 ~ 18721343 (+) |
| AMCG00018681 | NA | other | upstream | 1496674 | 17981140 ~ 17983017 (+) |
| AMCG00018762 | NA | other | downstream | 491183 | 19971139 ~ 19974730 (+) |
| G118557 | NA | other | downstream | 779421 | 20259377 ~ 20260940 (+) |
| AMCG00018781 | denr | other | downstream | 892263 | 20372219 ~ 20374812 (+) |
| G118623 | NA | other | downstream | 1034204 | 20514160 ~ 20514491 (+) |
| G118635 | NA | other | downstream | 1112780 | 20592736 ~ 20593016 (+) |
