G118410


Basic Information

Item Value
gene id G118410
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 19994126 ~ 19994329 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU148377
ttcacactgactgtctctgcggattgtcctgcacacattcacacaacacagcctgaacaccggccagttattcatacaatattaataccatcggctgctacgatccgattattatcctagtttattttaactagtcaggcgctgcaccggtcctgtgaaatccaagtttttaatgcactcggatattaactgtatcagtcattg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU148377 True 204 lncRNA 0.43 1 19994126 19994329

Neighbor

gene id symbol gene type direction distance location
AMCG00018759 orai1,LOC106585507,LOC108232614,LOC106568227,LOC105014888 coding upstream 27347 19959738 ~ 19966779 (+)
AMCG00018758 NA coding upstream 104395 19874328 ~ 19889731 (+)
AMCG00018753 NA coding upstream 142335 19805838 ~ 19851791 (+)
AMCG00018752 NA coding upstream 222172 19751614 ~ 19771954 (+)
AMCG00018757 NA coding upstream 261351 19729815 ~ 19732775 (+)
AMCG00018764 tmem120b,LOC107373355 coding downstream 32623 20026952 ~ 20035662 (+)
AMCG00018763 setd1ba,LOC107689149,LOC107658592 coding downstream 63509 20057838 ~ 20083148 (+)
AMCG00018768 NA coding downstream 100796 20095125 ~ 20097742 (+)
AMCG00018769 NA coding downstream 104734 20099063 ~ 20111187 (+)
AMCG00018767 NA coding downstream 117574 20111903 ~ 20119142 (+)
G118304 NA non-coding upstream 415095 19576964 ~ 19579031 (+)
G118291 NA non-coding upstream 514170 19479691 ~ 19479956 (+)
G118290 wscd2,LOC107597274,LOC107743343,LOC107696066 non-coding upstream 520666 19467823 ~ 19473460 (+)
G118285 NA non-coding upstream 537143 19456142 ~ 19456983 (+)
G118013 NA non-coding upstream 1263314 18466368 ~ 18730812 (+)
G118566 NA non-coding downstream 284959 20279288 ~ 20299830 (+)
G118572 NA non-coding downstream 308341 20302670 ~ 20302958 (+)
G118601 NA non-coding downstream 382959 20377288 ~ 20381442 (+)
G118608 NA non-coding downstream 444631 20438960 ~ 20443229 (+)
G118618 NA non-coding downstream 496532 20490861 ~ 20491106 (+)
AMCG00018762 NA other upstream 19396 19971139 ~ 19974730 (+)
AMCG00018740 NA other upstream 512034 19373472 ~ 19482092 (+)
AMCG00018732 NA other upstream 759775 19223168 ~ 19234351 (+)
AMCG00018717 trpv4,LOC106585668 other upstream 1085170 18894335 ~ 18908956 (+)
AMCG00018712 NA other upstream 1154031 18827597 ~ 18840095 (+)
G118557 NA other downstream 265048 20259377 ~ 20260940 (+)
AMCG00018781 denr other downstream 377890 20372219 ~ 20374812 (+)
G118623 NA other downstream 519831 20514160 ~ 20514491 (+)
G118635 NA other downstream 598407 20592736 ~ 20593016 (+)
G118636 NA other downstream 599037 20593366 ~ 20594139 (+)

Expression


Co-expression Network