G118620


Basic Information

Item Value
gene id G118620
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 20499674 ~ 20500210 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU148641
cttcatctgaTTGTCACAATATCTTCTAATGGCTCTTATGCCTAGATACAATCAAAATATTGACCTTCTAACCAAATACACGATGCCTGCTTTCTATTTGGCAGCAGCAAGGAGGAGTTTGGTTTCGGGTTTGGAATTTGTCACAGGTGGGTGGCCCAAAGTTTTGATTCATTCAGAGGTGTAAATGAACCCCAAGGTAGCACTAAAAAGCCTTGGGAGCTAAATATTCACATAACATTCCCTTTATTGTACCATAGCCTAGTGGTACATCGTGGCTGGGTCTGgagcatgtgtgcgtgtgcatgcgtgtgtgtgtgtgtgtgtgtgtgcgttgtgGTAAGGCTGTGCAGAGCCGCTTGGCCCACTCACCCAGGAGAGCCGAGTTGCCGTCTCCGAGGGGGAAGCGCTGGTATCGCGGCACGTTCAACGGGGGCAGCAGGTGGAACTTCTTCTCCAGCAGCGGCTCCAGTCGGGAGGCAGAGGGGTCGGCTGGATGGAACAGGTTGTACACCTGCTGGCAGGCTGGGCGGAGCTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU148641 True 537 lncRNA 0.52 1 20499674 20500210

Neighbor

gene id symbol gene type direction distance location
AMCG00018782 arl6ip4 coding upstream 14745 20477126 ~ 20484929 (+)
AMCG00018789 NA coding upstream 36325 20457965 ~ 20463349 (+)
AMCG00018783 NA coding upstream 66019 20408073 ~ 20433655 (+)
AMCG00018784 NA coding upstream 101337 20383129 ~ 20398337 (+)
AMCG00018775 NA coding upstream 150732 20322418 ~ 20348942 (+)
AMCG00018793 kmt5a coding downstream 130793 20631003 ~ 20637704 (+)
AMCG00018791 snrnp35,LOC102792111 coding downstream 142119 20642329 ~ 20645241 (+)
AMCG00018799 tmed2,LOC105026094,LOC108425203 coding downstream 170626 20670836 ~ 20678821 (+)
AMCG00018804 NA coding downstream 195472 20695682 ~ 20697892 (+)
AMCG00018803 NA coding downstream 198012 20698222 ~ 20705953 (+)
G118618 NA non-coding upstream 8568 20490861 ~ 20491106 (+)
G118608 NA non-coding upstream 56445 20438960 ~ 20443229 (+)
G118601 NA non-coding upstream 118232 20377288 ~ 20381442 (+)
G118572 NA non-coding upstream 196716 20302670 ~ 20302958 (+)
G118566 NA non-coding upstream 199844 20279288 ~ 20299830 (+)
G118621 LOC107554528,LOC107654556 non-coding downstream 740 20500950 ~ 20501433 (+)
G118622 NA non-coding downstream 3906 20504116 ~ 20504507 (+)
G118624 pitpnm2 non-coding downstream 17049 20517259 ~ 20517494 (+)
G118625 pitpnm2 non-coding downstream 23228 20523438 ~ 20523721 (+)
G118626 NA non-coding downstream 36524 20536734 ~ 20576007 (+)
AMCG00018781 denr other upstream 124862 20372219 ~ 20374812 (+)
G118557 NA other upstream 238734 20259377 ~ 20260940 (+)
AMCG00018762 NA other upstream 524944 19971139 ~ 19974730 (+)
AMCG00018740 NA other upstream 1017582 19373472 ~ 19482092 (+)
AMCG00018732 NA other upstream 1265323 19223168 ~ 19234351 (+)
G118623 NA other downstream 13950 20514160 ~ 20514491 (+)
G118635 NA other downstream 92526 20592736 ~ 20593016 (+)
G118636 NA other downstream 93156 20593366 ~ 20594139 (+)
AMCG00018792 LOC106928543 other downstream 101746 20601956 ~ 20603315 (+)
AMCG00018800 ddx55,gtf2h3,eif2b1 other downstream 179070 20679280 ~ 20695194 (+)

Expression


Co-expression Network