AMCG00019651 (pfkp)


Basic Information

Item Value
gene id AMCG00019651
gene name pfkp
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 35106126 ~ 35148291 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019651
ATGGCGCAGCAGCCGGATCACAAGAAATTTTTCGAGAACCTCTCCGGTGCCGAGAAAGCCATCGGCGTCCTGACGAGCGGCGGGGATGCGCAAGGTATGAATGCAGCAGTTCGTGCTGTTGTACGAATGGGGATTTATGTGGGAGCCAAAGTGTATTTTGTTCATGAGGGTTACCAGGGAATGGTAGATGGAGGAGATAACATAGAGGAGGCCACATGGGAAGGTGTCTCAAGCATGTTACAAGTGGGCGGCACCGTCATCGGAAGCGCCCGCTGCAAGGAGTTCCGCACCCACGAGGGCCGCCTGAAGGCCGCCCACAACCTGGTGCAGCGCGGGATTACCAACCTGTGTGTGATCGGAGGGGACGGCAGCTTGACTGGAGCCAACCTGTTCAGAGAGGAGTGGAGCGGCCTGCTGGAGGAGCTCGTGCAGAAGGGTGCTGATGGGTTTCCTTTACTGTGCATTCACGTCATTGCAGCATCAGTGTCTTGTTTAAGCCACTGGTTCTTGGTCTGTGAACCTGAGAgactAATTGATGAGGAGGCAGCCCAGAAATACTCTTGTCTTCACATCGTGGGGATGGTTGGGTCCATCGACAATGACTTCTGTGGCACCGACATGACCATTGGCACGGACTCTGCCCTGCACAGGATCATTGAAGTTGTGGATGCCATCATGACCACGGCACAAAGcCACCAgagaacatttgttttggagGTTATGGGAAGACACTGTGGATACCTGGCTCTAGTGAGTGCCTTAGCCTGCGGAGCCGACTGGGTGCTCATTCCCGAGATGCCCCCCGAGGACGGCTGGGAGGAGCAGATGTGCCAGAAATTGTCAGAGAGTCGGTCCCGTGGTTCACGGTTGAACATTATCATAGTTGCTGAAGGAGCCCTTGACAGACATGGGAAAGCAATTACTTCTAATATTGTCAAGGATAATCGTGCACGAAAGAAAAGGCTGAATATCATTATTGTAGCGGAGGGGGCGATTGATTCTAAGAACAAACATATTACCTCAGAGCATATTAAGGATCTTGTGGTGAAGTGCCTGGGATTTGACACTCGGGTCACAATCCTGGGTCACGTCCAGAGAGGAGGAACCCCTTCCGCCTTTGACAGGATCCTGGCCAGCAGAATGGGAGTTGAAGCTGTTCTTGCTCTCTTAGAAGCATCCCCCGATACACCGGCCTGCgttgtgtctctgtgtggaAACCAGTCAGTCCGACTGCCGCTTATGGAGTGTGTGCAGATGACACAAGAGGTACAGAAAGCTATGGATGAAAAGAAATTTGAGGAAGCTGTGAGACTACGCGGCAGGagttttgaaaacaatttaaatacttACAAACTCTTGGCTCACCGGAAACCACAATCTGAGCTTCCAAATAGCAGCTTCAACGTGGCTGTGCTAAACGTGGGTGCCCCGGCAGCGGGCATGAATGCCGCGGTGCGCTCGGCCGTGAGAGTGGGCATCACAGAGGGGCACAAGATGTTTGCTGTGAGCGATGGATTCGAAGGGTTCTCCAAGGGGCAGattaAGGAGATCAAATGGGGAGATGTTGGAGGGTGGACTGGTCAAGGTGGCTCTTTATTAGGAACCAAACGAACACTTCCTGCAAAGCACTTTGAGAAAATTGCTGAGCAAATGCGAATGCATAACATCAATGCATTGCTCATTATTGGTGGATTCGAGGCCTACCTGGGACTCTTGGAACTGTTAACAGCCCGGGAGAAATATGACGAATTGTGTGTCCCAATGGTTATGGTTCCTGCCACTGTATCCAACAATGTACCGGGCTCAGATTTCAGCATTGGTGCAGATACAGCTCTGAACGCTATTACTGATCGCAACATTTCAGATCTGTGCTTCAAACGTAACGCACCTTGCGTAAACGTGTATGTGTCACACCGCATACTACTCCCTCTCTTCTATGCCAATGGGAAGCCAAACTCGCTATCACACGGAAAGGGTCTCAAACAGGGTACACCTTTCAAGACGAGAAGGTGCTTAACCCTAACGATGTACTGCTTTATACTGCTGCTTCAGGCATTTGAGTGTTTGCTGCAGCTTTGTGAGGCACGTGCTACCTTCGAGGAGTTTTGCATCCCACTGTGTATGCTGCCTGCTACCATTAGTAACAATGTGCCAGGCACTGATTTGAGCATTGGTGCTGACACGGCTCTGAATGCCATTGTGGAGaCCTGTGACCGGATCAAGCAGTCTGCCAGTGGGACGAAGCGCCGTGTCTTTATCATTGAGACCATGGGGGGATACTGCGGCTATCTGGCCAGTGTTGGCGGTCTGGCGGCCGGGGCAGACGCTGCCTATATATTTGAGGAGCCCTTTGATATCCGTGACCTTCAGtctAATGTGGAGCACTTGACAGAAAAGATGAAAACCAGCATCCAGCGGGGCTTAGTGCTGAGAAATGAGAACAGCAGTGAGAACTACACCACTGACTTCATCTACCAGCTGTActctgaggaggggaggggagtgtTCGACTGCAGAAAGAATGTACTCGGTCACATGCAGCAGGGAGGGGCACCTTCTCCATTTGACAGAAACTTCGGGACAAAGATATCGGCTAAAGCTATGCAGTGGATCTCTAAGAAGCTCAAGGAGACCTACAGACAAGGGAGAGTGTTCGCCAACACTGAGGACACCTGCTGCCTGCTGGGCATGCGCCGCCGCGCTCTCATCTTCCAGCCTGTAGTGCAGCTCAAGGAGGACACTGACTTTGTCCACAGAATCCCTAAAGAGCAGTGGTGGCTGAAGCTCCGCCCGCTGATGAAGATCCTCGCCAAGTACAAGACCAGCTACGACGTGTCCGACTCCGGGCAGCTGGAGCACATCGTGCGCAACCGACCCAAAGAGTCCGAGGGCGCCGCCATCTGAACGAGTGGACCAGAACTCCTCTGTCCTGTAGACTGATTCTTAGCGTTGTTTGTAAGAGCGCTAATGCAGCTTGTTGTCCTTTTAAGAATAACTGTACTGGCACTTTATGTCCTATTATGTAACGATTAACCCTTCTGTTATTTAAGGTCCTGTATAGAAAATTTTCCAGAAACCAAAATTTTAGCTGCAGTGGTGCGATTTCTCACTCCAGATTATTTTTCACCGCCTGACAGTACAGACAAGCACCCGCTTTCCTCCAGCCACGTAATGTTGTGTCGTCACTATGTAATTGCACTTTGTAACGAACCTGTGGTTTGTGTGAAACGTCTGAAATTAGACCGAGTAGTTCTGCTGGTGTGAAGCTGACAGATGTATTTGAGATCAATTGCAATAAACATACTGTTGCAAAAGA

Function

symbol description
pfkp Enables identical protein binding activity. Predicted to be involved in canonical glycolysis; fructose 1,6-bisphosphate metabolic process; and fructose 6-phosphate metabolic process. Predicted to act upstream of or within cellular response to leukemia inhibitory factor. Located in cytoplasm.

NR:

description
PREDICTED: ATP-dependent 6-phosphofructokinase, platelet type isoform X4

GO: NA

KEGG:

id description
K00850 pfkA, PFK; 6-phosphofructokinase 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019651 True 3316 mRNA 0.51 24 35106126 35148291

Neighbor

gene id symbol gene type direction distance location
AMCG00019640 lancl2 coding upstream 396203 34685047 ~ 34709923 (+)
AMCG00019639 tgfbr1,tgfbr1b,LOC108441711,LOC107561948,LOC107100676 coding upstream 455868 34628457 ~ 34650258 (+)
AMCG00019637 LOC106569208 coding upstream 663322 34389213 ~ 34442804 (+)
AMCG00019636 gfod1,si:ch211-276f18.2,LOC108436094 coding upstream 797182 34218907 ~ 34308944 (+)
AMCG00019635 LOC106590280,LOC105019483 coding upstream 891583 34180782 ~ 34214543 (+)
AMCG00019653 NA coding downstream 203152 35351443 ~ 35374283 (+)
AMCG00019660 NA coding downstream 568054 35716345 ~ 35732258 (+)
AMCG00019669 NA coding downstream 1038761 36187052 ~ 36190796 (+)
AMCG00019670 tyms coding downstream 1048760 36197051 ~ 36201191 (+)
AMCG00019677 NA coding downstream 1942732 37091023 ~ 37169287 (+)
G35880 NA non-coding upstream 7209 35098707 ~ 35098917 (+)
G35874 NA non-coding upstream 20176 35077039 ~ 35085950 (+)
G35820 NA non-coding upstream 296085 34809659 ~ 34810041 (+)
G35816 NA non-coding upstream 366007 34739889 ~ 34740119 (+)
G35814 NA non-coding upstream 386265 34686486 ~ 34719861 (+)
G35933 NA non-coding downstream 566123 35714414 ~ 35715003 (+)
G36033 NA non-coding downstream 1011523 36159814 ~ 36160156 (+)
G36046 NA non-coding downstream 1057137 36205428 ~ 36208506 (+)
G36054 NA non-coding downstream 1077747 36226038 ~ 36227349 (+)
G36088 NA non-coding downstream 1479399 36627690 ~ 36628070 (+)
AMCG00019641 NA other upstream 254803 34840316 ~ 34851323 (+)
AMCG00019638 LOC107757182 other upstream 527686 34454209 ~ 34578440 (+)
AMCG00019609 NA other upstream 2713150 32324400 ~ 32392976 (+)
AMCG00019605 NA other upstream 2788555 32310037 ~ 32317571 (+)
AMCG00019551 lsm5 other upstream 5801120 29300955 ~ 29305006 (+)
AMCG00019662 hacd1,LOC105890814,LOC106590135,LOC106578705 other downstream 898186 36046477 ~ 36063850 (+)
AMCG00019671 adcyap1,paca,LOC106578701 other downstream 1144055 36292346 ~ 36299547 (+)
AMCG00019676 NA other downstream 2030068 37178359 ~ 37213519 (+)
G36212 NA other downstream 2365696 37513987 ~ 37516027 (+)
AMCG00019708 vps41,LOC102790284 other downstream 3430025 38578316 ~ 38632178 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000070_02197425_02225261 PFKPB, PFKP coding CI01000070 null 2197003 ~ 2225261 (-)