AMCG00020087


Basic Information

Item Value
gene id AMCG00020087
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 9307909 ~ 9327357 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020087
ATGGTGGTGTCTTCGGTGACCTCCTCCAGCCACTCGGCCCCCTCCATGGTACACATGTGGATCTTCAGCACCTTCCCTGCGAAGATCTTCTCCTCCTGCACAAACATAGCTCCTCTCCTGCCCCGAAGCCCGAAAACCACGATGGAAGAAAAAAGGCAGACTACTCCGTTTTCACTCGCACTCGTCCAGTCAGAGGTGCGGAACACGCTGTGCGCCGAGCGAAGTGCCTCAgcaaaggcacagatcaggggctCAGGAAAGAGCAGCCAGGGACAGAGAGGAAAAGTAAACGAAAGAGCAGACAGGCAATGGCCACATTTCTTGACAAGCATGAAGCACCAGCACTACGTACTGCCATCCTCAGCTGCTGCCAGGCCTCTGACGCAGCGAGGTCATTCTTACGTCATCCAGCACGACATACTGGGCATTGCGTGCTGTGGCCCCAGTGACGACTGGAAAGAGCAGGAGCGCCAGAGAAAACTGGAGCGCCAGAAAGAGCAGGAGCGCCAGAAAGAGCAGGAGCGCCAGAGAGAACTGGAGCGCCAGAGAGAGCAGGAGCGCCAGAGAGAACTGGAGCGCCAGAGAGAACTGGAGCGCCAGAAAGAGCAGGAGCGCCAGAGAGAGCGGGAGCGCCAGGAGGAGCGGgagcgacagagagagaaggagcgCCAGAAATTGCAAGAGCGCCAGAAAGAGCGGGAGCGGCAGAAAGAGCAGGCCCGCCAGAGAGAACTGGAGCACCAGAGAGAGCTGGAGCGCCAGAGAGAGCTGGAGCGCCAGAGAGAGCTGGAGCGCCAGGAGGAGCGGGAGCGCcagagagagcaggagcagCAGAAATTGCAAGAGCGCCAGAAAGAGCGGGAGTGCCAGAAAAAACAGGCGCGCCAGAAAAAGCGGGCGCGCCAGAGAGAGCACGAAACCAGCCACAACCTGGGGGATGGTGCTGAGAAACACAGCCTCACTGCCACCTCCAGCAAAGGCAGCAAAGTGTATGTCTCCTTTGGATTGCTTACAGAGCGCCAGTCCTCCCCCTCGCTGAGTAGGACCTCTGTGGAGGGACGCCCTCCACCTGTtcccatctctgcagcactgcCAGTGGAGTCCTGCTCTGTGGTCCAGAGGCAGCACAGTCTcctgggGTTCCCAAACCTTGGGAAGACGTGCTACATGAACGCCACACTGCAGTGCCTGTTCGCTCTGCCCTCCTTCTGCAGGGACCTCCTCAGGCAAGAGAAATCATGGAGGAGGTCCCCCCCGACTCAGCTGCTCAGGTGTCTTGCAGAGCTTCTGGCTGCGAAGGACACGGCCAGCCTGGGCCAGAAGAAGCAGCTGCTGAGGAGAGTGAAGACCGCTGTCTCCACCGCGGCACCCTGGTTCTATGGCGACAAACAGAACGACGCTCATGAGTTCCTGGGCCTTTGCCTGTCCCAGATGAAGGAGCAGGGTGAGCCGCTGAATGTGGCCCAGAGTGTGGGGCTCCTGCGTGGGGATGCTGTTGAGGGATACACCTGCCCCGTGGTGACCAACCTGGATTTTGAGATCCATCACAACCGCAGCTGTACAAGCTGTGGAGCTCAAGTCATCTCCAGAGAGGCCTGCACCTACCTGTCCCTGGACATCCTGCCTCAGAGATCCGTCCAGGACTGCCTAGACCTGTATTTCAAGGAGACTAAGATCGAGTGCAGCTGCCAGAACTGCCCAGGACAGAGGGCCCTGGTCACCCCTCAAGTGCTAGTCCTGCAGATGAAGCGTTTCAGCTTTGAGGACCACAGCCACGTCCCCATCAAATTGCATGAGCGGGTGCAGATTCCCCTGGACCTGACCCTGCACCCTTACTGCAGGGAGGCTGTGCGGCCGCCCCGCGCTCTGGGCTGGACTGCAGAGCCCACCGTGCTGGTGGAGGGGCTGAGCGAAGACGAGCTGCTGGCGGCCGTGCTGCAGATGAGTCTGCGGGAGGGCTTGCCGTCTGCAGCCCCCTCAGCCCTGCGGGATGAAGAGCGACTCAGCAGCCCCGAGGCAGGACTGAGAGCggggcagagacacagagcCCCGCTCTCTGAGACGCTGCTCTCTGCAGAGTCTGCCCCTGTGAAGCAGCAGCGCCCAGAGGAGCCCCAACAAAAGACAGGCAGGGTAGATCATCAGAAGGACATGCCACCCAACCGCTACCGCCTGGTCAGCATGGTCAGCCACCTCGGGAGGAGCACGACCTCTGGTCATTATGTCAGTGATGCGTATAGCATTGCGCATCAGCGCTGGCTGGCATTTAATGACAACGAGGTGGTGGACACAGAGGAGAAGGCCGTGCTGGAGCAGGGAGAGAGGACTGGATACCTGCTCTTCTACATGCACAGTGATGCTGCAGAGGAGGTGTCCCAGTCCAGGGGGACGGATCAGGCTCATGGGAGGGTGCTGCTGCCTCCGGCCCTGGACGTGCCCCGGCCCAGGGCTGATGGAGACCCCCTGGCCCCAACCCCTCATCCTCCTGTGACCGTGTCCTGTATCAATTCAGTCCACTCCTCTGGCTACTTGCAATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020087 True 2538 mRNA 0.60 17 9307909 9327357

Neighbor

gene id symbol gene type direction distance location
AMCG00020084 NA coding downstream 114449 9169552 ~ 9193460 (-)
AMCG00020079 inpp5e,LOC105889666 coding downstream 140842 9162006 ~ 9167067 (-)
AMCG00020083 NA coding downstream 159598 9145242 ~ 9148311 (-)
AMCG00020080 cacfd1,LOC102799429,LOC106562965 coding downstream 162824 9137733 ~ 9145085 (-)
AMCG00020082 NA coding downstream 180841 9115473 ~ 9127068 (-)
AMCG00020088 LOC102213968 coding upstream 73295 9400652 ~ 9444244 (-)
AMCG00020093 NA coding upstream 177029 9504386 ~ 9510745 (-)
AMCG00020094 NA coding upstream 214991 9542348 ~ 9547581 (-)
AMCG00020096 LOC103397832,LOC103359842,LOC101161976,LOC104923669,LOC104962502 coding upstream 405626 9732983 ~ 9738219 (-)
AMCG00020097 ppil3 coding upstream 411481 9738838 ~ 9741015 (-)
G60839 NA non-coding downstream 4662 9269560 ~ 9303247 (-)
G60833 NA non-coding downstream 147176 9157927 ~ 9160733 (-)
G60774 NA non-coding downstream 290503 8980273 ~ 9017406 (-)
G60730 NA non-coding downstream 498016 8807020 ~ 8809893 (-)
G60725 NA non-coding downstream 508742 8798964 ~ 8799167 (-)
G60993 NA non-coding upstream 600620 9927977 ~ 9928866 (-)
G61027 NA non-coding upstream 758556 10085913 ~ 10091086 (-)
G61052 NA non-coding upstream 876482 10203839 ~ 10205678 (-)
G61098 NA non-coding upstream 1179051 10506408 ~ 10507637 (-)
G61136 NA non-coding upstream 1369261 10696618 ~ 10698099 (-)
G60746 NA other downstream 467964 8839211 ~ 8839945 (-)
AMCG00020066 fam69b,fa69b other downstream 479800 8812785 ~ 8828109 (-)
G60516 NA other downstream 1745317 7440803 ~ 7562592 (-)
AMCG00020019 NA other downstream 2836475 6467271 ~ 6471434 (-)
G60348 NA other downstream 2841323 6463548 ~ 6466586 (-)
G61170 NA other upstream 1428111 10755468 ~ 10756419 (-)
G61269 NA other upstream 2368334 11695691 ~ 11701645 (-)
AMCG00020159 NA other upstream 2674343 12001700 ~ 12052211 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other upstream 3157012 12484369 ~ 12509937 (-)
G61589 NA other upstream 3670481 12997838 ~ 12998223 (-)

Expression


Co-expression Network