AMCG00020140 (mapkap1)


Basic Information

Item Value
gene id AMCG00020140
gene name mapkap1
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 11098474 ~ 11109758 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020140
ATGGAGGACAGTCATGttTCCAAGGAGAACCTTACTCACACTAACATTGTCATTCTCTACCTTGTAGGTCATGCAATATTTAAGCTCACATATCTAAGCAATCATGACTACAAACCTCTCTACTTTGAATCAGATGCTGCTACTGTCAACGAAATAGTGCTGAAGGTGAATTACATCCTGGAGTCCCGGGCGAGCACATCACGGGCGGACTACTTCGCGCAGAAGCAGCGGAAACTGAGCCGGCGGACGAGCTTTAGCTTCCAGAAAGAGAAGAGGTCAGGCCAGCAGTGA

Function

symbol description
mapkap1 Predicted to enable phosphatidylinositol-4,5-bisphosphate binding activity. Acts upstream of or within cell migration involved in mesendoderm migration and regulation of cell projection assembly. Predicted to be part of TORC2 complex. Predicted to be active in cytoplasm and plasma membrane. Orthologous to human MAPKAP1 (MAPK associated protein 1).

NR:

description
PREDICTED: target of rapamycin complex 2 subunit MAPKAP1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020140 True 291 mRNA 0.48 4 11098474 11109758

Neighbor

gene id symbol gene type direction distance location
AMCG00020135 LOC103036375,LOC107681247,LOC108423724,LOC102294584,LOC107560229 coding downstream 154710 10934775 ~ 10943764 (-)
AMCG00020136 NA coding downstream 281549 10783364 ~ 10816925 (-)
AMCG00020133 NA coding downstream 319087 10773696 ~ 10779387 (-)
AMCG00020132 NA coding downstream 370943 10704975 ~ 10727531 (-)
AMCG00020124 NA coding downstream 450635 10631292 ~ 10647839 (-)
AMCG00020141 mapkap1 coding upstream 34937 11144695 ~ 11162222 (-)
AMCG00020139 mapkap1,LOC107103532 coding upstream 71628 11181386 ~ 11187648 (-)
AMCG00020151 angptl2,LOC106579898,LOC107669255 coding upstream 708967 11818725 ~ 11843715 (-)
AMCG00020155 NA coding upstream 849859 11959617 ~ 11960888 (-)
AMCG00020153 fbxw2,LOC106571134 coding upstream 863865 11973623 ~ 11989110 (-)
G61206 NA non-coding downstream 105228 10992899 ~ 10993246 (-)
G61203 NA non-coding downstream 128875 10967180 ~ 10969599 (-)
G61201 NA non-coding downstream 135964 10962311 ~ 10962510 (-)
G61200 NA non-coding downstream 137040 10961136 ~ 10961434 (-)
G61137 NA non-coding downstream 397591 10698129 ~ 10700883 (-)
G61273 NA non-coding upstream 603743 11713501 ~ 11723414 (-)
G61302 NA non-coding upstream 815806 11925564 ~ 11927864 (-)
G61424 NA non-coding upstream 1284527 12394285 ~ 12395028 (-)
G61470 NA non-coding upstream 1321044 12430802 ~ 12451793 (-)
G61477 NA non-coding upstream 1384043 12493801 ~ 12499426 (-)
G61170 NA other downstream 342055 10755468 ~ 10756419 (-)
G60746 NA other downstream 2258529 8839211 ~ 8839945 (-)
AMCG00020066 fam69b,fa69b other downstream 2270365 8812785 ~ 8828109 (-)
G60516 NA other downstream 3535882 7440803 ~ 7562592 (-)
AMCG00020019 NA other downstream 4627040 6467271 ~ 6471434 (-)
G61269 NA other upstream 585933 11695691 ~ 11701645 (-)
AMCG00020159 NA other upstream 891942 12001700 ~ 12052211 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other upstream 1374611 12484369 ~ 12509937 (-)
G61589 NA other upstream 1888080 12997838 ~ 12998223 (-)
AMCG00020212 NA other upstream 2107238 13216996 ~ 13224512 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000337_00662237_00695054 MAPKAP1 coding CI01000337 null 662237 ~ 695054 (+)