G65776


Basic Information

Item Value
gene id G65776
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 33805701 ~ 33852626 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU82240
GGAACCGGGAAAGGGTGAAGTCTGGatcttgaaaaagaaaaagaaaaaaaaaaaagctgtgggGTAATCGATTCCACTCCCTGCCTCCCTGGAGAATGGTGGTGGAGCTGCCTGGGAGGGAGCTGCCATCCCAGCAGCCATTCTGCACTTACTGATGCATCCTGGGAGAATTCCTCTGCTCCTCCGGCTCCTTAAACGCCTAATGCAGTGCATTAGCTCCCCCCGCTTAGCATCTGAAAGAGCTACAGAGCAACTGAAGTGAATTACACACTTACCCAAGGCAGGAGACCTGGGGCGAGCTGCCATCCCGGCCCCCGTGAGTCACTAACAGCTTTCTGAAATGCGAAAGTGCGAAAACGCAGACAAACGGATCGCTGTTTGGGATCGCTTGCACGTCGGTATCACGGGGGAagtggttttcattttctttcaggtGGACCTggatttcatttaaacattcacaGAGAAGCACAACAAGACACTCGAGTCGCAGGCAGTTCTTTGAGAGACTTTCTTTAATGGCACATTATGAGTAGTGCTACGCTTACATGTCTGATGattaattacaatattacaaagagctacccaaaaaaaacaagtaaacaaacaaaaactaaaaaactggAAAAGCAGGAAACAATTTACTTTGGCTCAGTGAACTCCTGAAGCTTtcggaaaaacaaaacaaaaaacccttCACATGattcagttattaaaataaacacaactaaAAAGCTTAACGATGTTAGATGTTGAACAGAGATGAACTTTGTACAGTACTTCTCACGTTGCTCAGAGTAAAAGTGCCTGGAGCTAGTGAAGATTCACTTTAAATGACCAAATCAGGGTTGTTCATTGTCGTCTCATTCGCCCAGCAGATATTCAACCCAAGCCCCGTCCACAAAGTTCATCTGACAGAATCATTCAATGACttcaatgattaaaaaaaacaaaaaaacagaacgaGTGATGAACTCTCCgtttcaagaaagaaaagaagaagagatcCTGTGGCcagttacacaaacaaacaagtttaCCTCCTGAAGTGTCACTAGGTTTTCACGAGTGCCATAACACAATGAAGTCTACTCAATAGTTAAGGGAGAAGCTGCATTCATTTATCCTTAAGGTGTTCAAAGCAGCCGCCCACTGGCCCAGATAACTGGCTTCTCATAGACCCTACAGAGAGACGCACCAGTGGAACTTCTGGTTATTTCCTTGTCGGGGTCCAGATGATGGATCCCACACGATGTGAAAAGGGGTCAGGCCACAGTCACCACGGGGGACTGGCACTACCGAGAACCCAACAACAGGACCGAGTGGACGTGCACAGCGATCGGACACCTGTCGAACAAGTAGATACATGAAAATATATCCTGTGAGCGAAAATGCCTGTGAAAACGACAATAATGAGGACATGTAGCCAgacatgtgtgtgcgtgtgtgtgcgtgtgtgtgtgtgtgaggaccTCGTAAAACAGGACTCCAATTGCTGGATTCCTGAATGTGGAGGTGGACCCACAGCAATGAAATGTTTCGatggaaatatgtaaaaaaaaaaaaaaaaaaaaacatgacctcCTACATGTGCTCTGCTACAGCTAGGCCGAGAAGTCACACCAGGGAGCCGGGCGCTTGGGTGATCTGCCGTTTGTTTGACCTCTCTATTATCACGTGGATAAGAATGagaaaaactgaatacaattaattttaaaatatagttacGAATCTTTGAATTGTGCAAGTGCCAGGTGAGGAACGACAGGTGAAAGCACAGCGAGTGGAGGCCTTGCCACCTCCAGCCTCCACCCCCAGCCCAAATCTGCTTTGTCCTCCGCTCTCCACGTGCCAGGCTCTGTCTCCTCTAGCGGTACAGAAATACAGGTcaccatatttacatttattttttaatccatgCGTGTACCATGCGGTTTCGTTTCCACGATCCTTACTGCCCTTCTCGATGCAGTTGCGGCAGTTTTTCTTATaagattataattaatttttacACCCAAGAGCTTCTCTTTGCATTTTAGGTCTGTTTCCCACACAAAAGATGCCTGCGATGAGGTCGGATTcttcttttaatcttttaatttccCCTCCCTTTAATTTAGCGAAGCCATGCGGACTGCGTTCCCATGCATCACAGCTAAATATAGACACGTACTTtgggtttttaatttatttcgggttcatttaataaacataacatacaaacaaacaaaaataagatcAATAAAACAGCCCAGTTTTGCTGCAGACAATGAAAGTCCTACCTTCACTGGGGGAAAGAGAAGTCAAACAGGGTTGGCCACTCAGACCTCCCCCACATCCCCACTTGCTATTGGACTCTTGAACTGGTCTTGAATGAACGCAAGCAAGACCACGAGACTTCCCACAATTTTTCAGTATCTTACTTTTCTTGTCCCGGACGCGGCTGTGAGCTCGCCCCTCTGGGTGTGAAAAAGCGCAGGGCACAGAGGCGTGGACAGCTACTGGACACACACGGCATGCAGGAAACCACAGGAAGAAAAGCACCATCAAAATCATACTCCACACTCAAAAAgaagatcaaataaaatcacGGAGGCTGccgaggattttttttttaacatccaaACCTTTCGGTTTGATTAATTGAAAGAGACACGACTGTCACGGTgactattttcattattttttgtttaaaggatAAACACGGGGCCCTGCCCTTCAAACTCACCATTAAAGCTTTTCTTATACATCCCCCTCCCTTTCTAACTCAGCTTGTGAAAGAAAggaatcaaacaaaacataacaaaaaaagaacagaaacaaagacacacCTCTTTGTCTCGGACCCTGTAACCCAGGCCTGACTCTCCTTCATCTCTGATCGCTACATTTCTGGCTCTGTACCTTCACAGTCGGATAAAGTGCAGCTTCTGCTACGGCTCTCCTCACAGAAGAGACACAACAGTAGTACAGCAGGCAGAGTTGCTACTGGGGGGGGTGTTCATAATAAAGAATAGAAGTGTGCAAGAAGCTGCCTAAAGTCAAACAAAGCACTGGGAGACACTGTTGAGGATGAAGCTTGTGCAACATTTTTGTATGTGCTTGTAATCACACTAAAACATCTGTCATAATACAGTTATAACATGCCTTCTTTAAAACGGATACTCTGAGAAGAGGAGAGATGGGTTAAGGGTTTTCGGGATGACCGAGGCTGGGAGAACTTGGGTCCTGCTCACTTTGCGTTTCACTAGGGAGGTCCAGTGACTGCCATGGGATTATACGCATCTAGTGGAAGTCTTTCACAGTGTCCGCCACGCGACGGCCAGCGCGCACCGCTCCAAATGCCTTTTCTTGGCCAGTTTCCTCCCAGAAATTCTCACAGTACAGGGACGCACAACTTCTCAGCACTACTTCACATGGCTGGTGTCGGACGAGCCCCAGAGACCTGCTTACACTGGAATCCTACCCGCCACCCGAATCTGAATAAGCACATTTGgagcataataaataaactgccaataaaattaaagcaaacagCCCCCTAGAATCTCACAAGAACATCGATCCAAGCCTGGGTTTCTCTCGTCTCTTTTCGCTCTCTCAGCAGATGAGCAGTGGATTTGGATTGATCGAGCCGGGAGTGAAAATGGCAGAACGGAGCCAAGGGTGCATCTGGGAAAACTGCACTTCTACACAAAACTGTGACTGGGATACCCTGCGCTGTGCAATGTCACTGCAGTCACAGCCAGTGTCGCTTCTGTCTCAGCTTGCCTGGTGTGACAATTCGGCCAGCTTCACCGCGGCCCGACACGCAAACTCGTGTTGCTGTAGCACAATGGAGTGCCCGTGCTTCCGGCAATACGCAAGCAATTCACACTAACCTAGCTACTGCTCTACATTCATTTAATGCCCTGACACGCCATGCTGTTTagtcttttttatatttctgctcTGTTGAAAACCATCCGCTGGtctaaaaatgcaataataatttaaaaagatcaaATAGCTGGGAGAcagcaggaaaaacagaagttaaaaaaaaaaaaacctacagaGGTGTGTATGTGCGTACTCTAAGTAAATACTGGGACTATATGCATCAAATGCTGATTTAagatactaaaacaaaacaaaaatcaatcaagataaataatactaatttaaaaacaaaagtttgacCGGGGGTTATTGTGCGGTTCGTTATGAAGGGACAgactctctctgtgtctctgcctgGACTCCCCGGTCGTCTCTATTCCCTCCTCTGCCCCGCCAGCGCCCCCGGCACCCCCGCACGGGACGCTTACTCCACCCGTTCACAGACAGACGGGTTCGCCTCGCTCTGGTGCTGAGCTGGGCGGGCCATCCTGTGAGATCAGACTAACTCCTCGTCCAGCAGTGTGGATTCAACTCTGAACAGTCTGAGCCCAGTGTGTGTATACTGATATGATCACCTCTGCCTCTAAAGTGCACGTCCTCCTCCACTCTTTTCCCAATTTGATCAGATTTccagttttctgttgttttggaACTCAAATACTGCGCTGTGACTCTGGGGGCCGCTGCTGAGATGCCAAAGCGAAGCGAAGCCaggaaaagaagagaagaggCGATTCAACTAGcaaacacacacccagacacGACTAAATCACCGTCCTTTCTAATTGGCTAGTGTGTAGTCGGATAGTTTGTCATTTATAATGGGCTAGTTTCCTATGGCTGAAATCGACACGGCACAGAGATAAAGGTCTGCAATATCGTTTCAGGAGCGACTAGAGGCATTTTTCTCcgtttttggttttaaataaatggctgCAGTCAGTTTCACTTCATAGTAACCAATTAGA
>TU82241
GGAACCGGGAAAGGGTGAAGTCTGGatcttgaaaaagaaaaagaaaaaaaaaaaagctgtgggGTAATCGATTCCACTCCCTGCCTCCCTGGAGAATGGTGGTGGAGCTGCCTGGGAGGGAGCTGCCATCCCAGCAGCCATTCTGCACTTACTGATGCATCCTGGGAGAATTCCTCTGCTCCTCCGGCTCCTTAAACGCCTAATGCAGTGCATTAGCTCCCCCCGCTTAGCATCTGAAAGAGCTACAGAGCAACTGAAGTGAATTACACACTTACCCAAGGCAGGAGACCTGGGGCGAGCTGCCATCCCGGCCCCCGTGAGTCACTAACAGCTTTCTGAAATGCGAAAGTGCGAAAACGCAGACAAACGGATCGCTGTTTGGGATCGCTTGCACGTCGGTATCACGGGGGAagtggttttcattttctttcaggtGGACCTggatttcatttaaacattcacaGAGAAGCACAACAAGACACTCGAGTCGCAGGCAGTTCTTTGAGAGACTTTCTTTAATGGCACATTATGAGTAGTGCTACGCTTACATGTCTGATGattaattacaatattacaaagagctacccaaaaaaaacaagtaaacaaacaaaaactaaaaaactggAAAAGCAGGAAACAATTTACTTTGGCTCAGTGAACTCCTGAAGCTTtcggaaaaacaaaacaaaaaacccttCACATGattcagttattaaaataaacacaactaaAAAGCTTAACGATGTTAGATGTTGAACAGAGATGAACTTTGTACAGTACTTCTCACGTTGCTCAGAGTAAAAGTGCCTGGAGCTAGTGAAGATTCACTTTAAATGACCAAATCAGGGTTGTTCATTGTCGTCTCATTCGCCCAGCAGATATTCAACCCAAGCCCCGTCCACAAAGTTCATCTGACAGAATCATTCAATGACttcaatgattaaaaaaaacaaaaaaacagaacgaGTGATGAACTCTCCgtttcaagaaagaaaagaagaagagatcCTGTGGCcagttacacaaacaaacaagtttaCCTCCTGAAGTGTCACTAGGTTTTCACGAGTGCCATAACACAATGAAGTCTACTCAATAGTTAAGGGAGAAGCTGCATTCATTTATCCTTAAGGTGTTCAAAGCAGCCGCCCACTGGCCCAGATAACTGGCTTCTCATAGACCCTACAGAGAGACGCACCAGTGGAACTTCTGGTTATTTCCTTGTCGGGGTCCAGATGATGGATCCCACACGATGTGAAAAGGGGTCAGGCCACAGTCACCACGGGGGACTGGCACTACCGAGAACCCAACAACAGGACCGAGTGGACGTGCACAGCGATCGGACACCTGTCGAACAAGTAGATACATGAAAATATATCCTGTGAGCGAAAATGCCTGTGAAAACGACAATAATGAGGACATGTAGCCAgacatgtgtgtgcgtgtgtgtgcgtgtgtgtgtgtgtgaggaccTCGTAAAACAGGACTCCAATTGCTGGATTCCTGAATGTGGAGGTGGACCCACAGCAATGAAATGTTTCGatggaaatatgtaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU82240 True 4850 lncRNA 0.45 2 33805701 33852626
TU82241 False 1594 lncRNA 0.44 2 33838247 33852626

Neighbor

gene id symbol gene type direction distance location
AMCG00020792 NA coding downstream 597925 33197632 ~ 33207776 (-)
AMCG00020790 NA coding downstream 649140 33146461 ~ 33156561 (-)
AMCG00020788 NA coding downstream 825176 32962541 ~ 32980525 (-)
AMCG00020787 NA coding downstream 979072 32825655 ~ 32826629 (-)
AMCG00020785 NA coding downstream 1057429 32746746 ~ 32748272 (-)
AMCG00020798 NA coding upstream 62955 33915581 ~ 33923435 (-)
AMCG00020804 es1,LOC108430344,LOC107553036,LOC107714576 coding upstream 140183 33992809 ~ 33995725 (-)
AMCG00020805 NA coding upstream 170393 34023019 ~ 34027562 (-)
AMCG00020803 NA coding upstream 204328 34056954 ~ 34075604 (-)
AMCG00020807 NA coding upstream 260017 34112643 ~ 34113689 (-)
G65753 NA non-coding downstream 531257 33274176 ~ 33274444 (-)
G65571 NA non-coding downstream 1290084 32515403 ~ 32515617 (-)
G65468 NA non-coding downstream 1589944 32212727 ~ 32215757 (-)
G65465 NA non-coding downstream 1617990 32186482 ~ 32187711 (-)
G65397 NA non-coding downstream 1744404 32058318 ~ 32061297 (-)
G65813 NA non-coding upstream 108551 33961177 ~ 33962191 (-)
G65815 NA non-coding upstream 129164 33981790 ~ 33982026 (-)
G65844 NA non-coding upstream 197370 34049996 ~ 34051069 (-)
G65845 NA non-coding upstream 199834 34052460 ~ 34053108 (-)
G65858 NA non-coding upstream 263980 34116606 ~ 34116943 (-)
G65756 NA other downstream 436596 33368625 ~ 33369105 (-)
G65679 NA other downstream 914208 32886364 ~ 32891493 (-)
G65641 NA other downstream 1148682 32655134 ~ 32657019 (-)
AMCG00020774 snrpg other downstream 1194993 32607862 ~ 32610708 (-)
AMCG00020767 NA other downstream 1246605 32554860 ~ 32559096 (-)
AMCG00020810 LOC103363194,LOC101160416,LOC107087288,LOC101481896,LOC107739988,LOC102234237,LOC107675956 other upstream 369689 34222315 ~ 34239697 (-)
AMCG00020836 snrnp27,snut3,LOC106585104 other upstream 955978 34808604 ~ 34814294 (-)
AMCG00020837 NA other upstream 986135 34838761 ~ 34841323 (-)
G66054 NA other upstream 1009993 34862619 ~ 34865305 (-)
AMCG00020853 H2AFV,h2afvb,LOC107386217,LOC105007341,LOC107668744 other upstream 1296942 35149568 ~ 35170179 (-)

Expression


Co-expression Network