AMCG00021847


Basic Information

Item Value
gene id AMCG00021847
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 32031688 ~ 32037579 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021847
TATGACCATTGAAGATCCAGAGAAAGGACTATGTGACCAGGATGGGGTTCCCATCAATCACTGCCATGACAATAGCCGAGCTttggaagacagagagagggagaaaaaacaagCGAGAAAAAGActatacattgtttcagttgTCTGTCTGGTCTTCATGATCGGTGAAATTGTAGGTGGGTACTTTGCTGGGAGTCTGGCCGTCATTACTGATGCAGCCCATCTCCTTGTGGACTTCACCAGCTTCATGATCAGCTTGTGTTCCCTATGGCTCTCCTCCAGGCCTGCCACAAAGAAGCTAAATTATGGATGGCACAGAGCAGAAATTCTGGGTGCCTTGCTTTCAGTTTTTACCATCTGGCTAGTGACAGGTGTGTTGGTCTACCTGGCCTGCAAGAGACTGATAACTGATGACTATGTTATCGAGGGCACTGTTATGCTCATCACCTCAGGATGCGCTGTAATAGCCAATATCATTAGCCACGGCCACGGGCACAGTCACCAGAAACACAGTATACAGGAGTCCAACAGCCATCCTCAGGGCAATGCTAGTGTGAGAGCAGCCTTTGTTCATGTTGTGGGAGACCTTCTACAAAGCATCAGCGTGCTGGTCAGCGCAGTCATCATCTTCTTTAAGcCTGAATATAAAATAGCTGATCCTATTTGTACATTTCTCTTCTCCGTGTTTGTGTTGGGCACTACTGCAACCATTTTACGGGATATCTTGGTGGTTCTAATGGAAGgtGCACCTGCTGGGGTTAATTACAATAGCATAAGAGAGAGGATTTTTACAGTGAAGGGGGTTAAAGCTGTTCATAACCTTCATATCTGGGCTCTCACAATGAATCAGGTTGTGCTTTCTGCTCATGTTGCCATAGATGACACGGTGGATCCTCAGTCGGCCCTTAAAGAAATCACCCAGGCTTGCTTCAAGAGCTTTGGCTGCCACTCTGTGACAATTCAAGTGGAGCAACAATCAGACCAGAAACCAGAGTGTGTCTTCTGCCAGGACCCCAAAAAC

Function

GO: NA

KEGG:

id description
K14695 SLC30A8, ZNT8; solute carrier family 30 (zinc transporter), member 8

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021847 True 1021 mRNA 0.47 7 32031688 32037579

Neighbor

gene id symbol gene type direction distance location
AMCG00021848 med30,LOC107706236,LOC107754270 coding downstream 13554 32011442 ~ 32018134 (-)
AMCG00021828 LOC107600623,LOC107666844,LOC107551188,LOC105905365,LOC107705775 coding downstream 681320 31310586 ~ 31350368 (-)
AMCG00021826 NA coding downstream 806307 31221983 ~ 31225381 (-)
AMCG00021831 NA coding downstream 923042 31093408 ~ 31108646 (-)
AMCG00021829 NA coding downstream 938318 31058059 ~ 31093370 (-)
AMCG00021846 NA coding upstream 9531 32047110 ~ 32047584 (-)
AMCG00021845 NA coding upstream 57946 32095525 ~ 32097519 (-)
AMCG00021861 NA coding upstream 1969080 34006659 ~ 34014890 (-)
AMCG00021860 LOC107748562 coding upstream 2142013 34179592 ~ 34189526 (-)
AMCG00021864 NA coding upstream 2205286 34242865 ~ 34249647 (-)
G88762 NA non-coding downstream 42638 31988774 ~ 31989050 (-)
G88742 NA non-coding downstream 171855 31859409 ~ 31859833 (-)
G88736 NA non-coding downstream 195449 31798752 ~ 31836239 (-)
G88643 NA non-coding downstream 1069592 30961703 ~ 30962096 (-)
G88562 NA non-coding downstream 1468888 30525746 ~ 30562800 (-)
G88795 NA non-coding upstream 57123 32094702 ~ 32094939 (-)
G88831 NA non-coding upstream 654692 32692271 ~ 32692496 (-)
G88866 NA non-coding upstream 1632888 33670467 ~ 33670919 (-)
G88871 NA non-coding upstream 1722693 33760272 ~ 33760620 (-)
G88873 NA non-coding upstream 1723663 33761242 ~ 33761474 (-)
AMCG00021830 eny2,LOC100694417,LOC103393926 other downstream 899503 31129583 ~ 31132185 (-)
AMCG00021820 NA other downstream 1143100 30877848 ~ 30888588 (-)
G88527 NA other downstream 1607076 30337583 ~ 30424612 (-)
G88405 dtbp1,dtnbp1,LOC106596829,LOC106606149,LOC106596393 other downstream 2288880 29730077 ~ 29742808 (-)
G88288 ctdp1,LOC107745039,LOC107698650,LOC107748359,LOC107672848 other downstream 2959928 29069201 ~ 29071760 (-)
AMCG00021849 NA other upstream 25806 32063385 ~ 32069464 (-)
AMCG00021867 LOC107596751,LOC107685553,LOC107743232 other upstream 2222425 34260004 ~ 34356907 (-)
G89004 LOC107685553,LOC107596751,LOC107743232,LOC107662664,LOC108270036 other upstream 2309409 34346988 ~ 34380295 (-)
AMCG00021868 slc6a19b,LOC108270036,LOC107596751,LOC107685553,LOC107743232,LOC106606020 other upstream 2341122 34378701 ~ 34388010 (-)
G89217 kif13a,LOC101479097,LOC102301062,LOC102786386 other upstream 3337437 35375016 ~ 35395771 (-)

Expression


Co-expression Network