AMCG00021879


Basic Information

Item Value
gene id AMCG00021879
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 34790268 ~ 34809602 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021879
atttattcatgttaaaaatataGTCGTAAAGATTACGCTTGTATTATATGTTAGCGCGTCTTCACAGTCAGTTTACTTGAAAGTGTATTTGAAGATTGTTTAATTTGCTGTTAAGATAATTTACTTTCAAGATGAACGTCACAGAAGTTGAAGAtcacatctcattaaaatatgaaataaaaagacGTCTCGGAAAGGGGGCCTATGGAATAGTCTGGAAAGCTGTTGACCGGAAGACGGGGGAGGTTGTTGCTGTAAAGAAGATATTTGATGCTTTCAGGAACAGAACAGATGCCCAGaggACATTCAGAGAAATAATGTTCCTTCAGGAGTTTGGAGAGCACCCCAACATCATCAAACTGCTGAATGTCATCAGAGCTCAGAATGACAAGGACATATACCTGGTCTTTGAATACATGGAGACAGATCTACATGCTGTCATAAAGAAAGGGAATTTGCTGAAGGATATTCATAAATGCTACATAATGTACCAGCTCCTGAAGTCGACAAAGTTCCTGCACTCAGGCAATGTCATACATAGGGATCAAAAGCCCTCCAATGTCTTGCTGGACACAGACTGCTTTGTGAAGCTGTGTGACTTTGGTCTGGCACGCTCCCTGTACCAGATCCAAGAGGATGCTGGGAACCCGGCGCTTACTGAGTATGTGGCCACGCGATGGTACCatgtATATTCAATAAAGTCAGAGTATGGAGCATCAGTGATCCAAAGAATGATGTCACGTCCCCGAATTCCACTGGAAAATCTGCTGCCACCCTCTGTGCCCCCAGATGGCCTGGATCTGCTAAGGAAATTGCTGGTCTTTAACCCTGATAAGAGACTCACTGCTGAGGAGGCATTGTCACACCCCTATGTCAGCAGGTTCCACAACCCTTTGAAGGAGCCCAGTTTGGACTACGATGTAGTTCTCCCAGTGGACGACGACACACAGCTGTCTGTAGCAGAGTATCGCAATAAGCTGTATGAGCGACATCAGGCCAAGATAAAGGAGGCTGGACCTGAAAAACAACCCCAGGAGCAAAAGGAGGAACGGCCACCTGCTCCTAAAGCCACCCCAGTGCCTGTGGCCACACTGCCCCCCGCTGGGGCAGctccacacagagacagaactGGAAACAGTTCAGAGAGCAGTCCTCAAACTGGCAAGACAATTTACAACCCCATAACGCACAATGCCACTCCATATGGGGCCCTTCAAAATGGTGGTACAAAATCTACCCACAATCCCTCAGCACCTCCCCAACAGCGTAGTTTAACCGCAAACAAGAAGCTTGTTCATCAGGCGAGCAATGAGAATGTCCAATCAACACCTACTGAAGGCACCAATATGGTCATTAGCCAGGCTGCAGTGAGAGGGATGGAGCAACAGAGAGGTCGTTCAGCCCCTGTCGCCCGGgctcgctctttctctctcacccaGAACCGCTTCAACAACCCTCTGGTCAGGAGAGATGAGCCGGACGTGGCAGCTGGGATCACAGTAGCCACCTCTCACCTGAATCAGAGGTCTCATTCACAGACGCGCGAAGTGCGGCCCATCCCCAAATTCAGTAAGAAGGTGTTCCAGAACTCCTCCAATGTTGGAACTGCGGGAGACCCCAAGGCTAAACTGGGGAGCTATGCACAGGCCTATGGGACCATTAACAAGACCGAATTGGAAAACCTTCTCCGGGTCCGCAATAACCAGTAATGCCTGTGGAAGTGAATGAGGAACAAGTCTTATTAATAACATCACCAAAGATAGAGATGTTAAAGGATGAGATCTTTGTGGACAAGATGGTCAACAATGCAATAGAACCAACAATATACGGTATCATTCATTAGGTACCTCTGTAGAGACTTTAAGTCAGTAAACTGTTGGCTTAATGCTCATCATTAGTTCAGACATTTATGAAGAATAAGATGACTCGCATGCCTCTTCTGTGACACTGTGATTATGACTCTTAATGCCTTGAAGGGACACTGGACAATGAAGTGAGCAGCAAGTCAGAAGTCTTCAGTCATCCGGTTCaagattttctatttttgtaggTCAGCTTTAACATAAAGAAATCTGTCCTGAATTAAAACATCCTCTtatgatatgtatttatatgttttatatgatatatttgtttcctaaggagttttatttaactttcatCTGAGAAATGTAACCTTAAGAtttcactgtattgtactgtatggATGAATTAGCATTTTCCGAAAAAGTTATTatacctttatcctatggtgaaacatttctatcctgatgggagtgctccatccacagggcaccagggctcactgaatggtgtgatgagtatgacaatgatgtgaatcatatgctatggccttcgcagtcaccagatctcaacccaattgaacacctatgggagactGGAccaatgtgttagacagcgctctccaccaccatcatcaaaacaccaaatgagggaatatcttttggaagaatggtgttcatccctccagtagagttcagagactcatagaatctgtgccaagagcattgaagctgttctggcagctcatggtgcccaacaccttaccgagacactttgttgtttttcctttcatttgtcacccgtctgtatatttaaatatttattgggaaagagagagggataggtatacatacacacaaaatgttCTAAAGTATGTTATTAGTAAGTGTTAAGTGCAAAGAGGACTATGAATCAGTGGGATTCAGGCAGGAGCCCTATTAATCTATCATTTGTCTTTGCAGCAGTTTTACATTGCTATAATATGCATGTACAGCAGTACTGTTATGTGAATTACTGGAGCAGCGGTGTGTGGTTATGGCTCTGGATTCCGGAGtcaaaggttgtgggttcagtcacAGGTAGGGGAGACTACTGTTGTGTCTTTGAGCAAGGTAC

Function

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0007165 signal transduction biological_process
GO:0004672 protein kinase activity molecular_function

KEGG:

id description
K19603 MAPK15; mitogen-activated protein kinase 15

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021879 True 2919 mRNA 0.44 13 34790268 34809602

Neighbor

gene id symbol gene type direction distance location
AMCG00021878 grina coding downstream 5556 34766852 ~ 34784712 (-)
AMCG00021870 NA coding downstream 32641 34745703 ~ 34757627 (-)
AMCG00021866 NA coding downstream 442235 34327158 ~ 34348033 (-)
AMCG00021863 LOC107751906 coding downstream 515557 34263815 ~ 34274711 (-)
AMCG00021865 NA coding downstream 529872 34251674 ~ 34260396 (-)
AMCG00021877 vps28,LOC107696523,LOC107592928 coding upstream 1554 34811156 ~ 34820379 (-)
AMCG00021885 kif13a coding upstream 501687 35311289 ~ 35351633 (-)
AMCG00021889 NA coding upstream 858702 35668304 ~ 35672523 (-)
AMCG00021888 NA coding upstream 917817 35727419 ~ 35740510 (-)
AMCG00021890 NA coding upstream 988588 35798190 ~ 35799107 (-)
G89011 NA non-coding downstream 369989 34419760 ~ 34420279 (-)
G89003 NA non-coding downstream 444279 34344635 ~ 34345989 (-)
G88991 NA non-coding downstream 503966 34284384 ~ 34286302 (-)
G88939 NA non-coding downstream 612787 34177047 ~ 34177481 (-)
G88918 NA non-coding downstream 809440 33976080 ~ 33980828 (-)
G89130 NA non-coding upstream 269971 35079573 ~ 35081173 (-)
G89212 NA non-coding upstream 560504 35370106 ~ 35370480 (-)
G89240 NA non-coding upstream 595455 35405057 ~ 35405340 (-)
G89247 NA non-coding upstream 644965 35454567 ~ 35455198 (-)
G89264 NA non-coding upstream 901861 35711463 ~ 35711716 (-)
AMCG00021868 slc6a19b,LOC108270036,LOC107596751,LOC107685553,LOC107743232,LOC106606020 other downstream 402258 34378701 ~ 34388010 (-)
G89004 LOC107685553,LOC107596751,LOC107743232,LOC107662664,LOC108270036 other downstream 409973 34346988 ~ 34380295 (-)
AMCG00021867 LOC107596751,LOC107685553,LOC107743232 other downstream 433361 34260004 ~ 34356907 (-)
AMCG00021849 NA other downstream 2720804 32063385 ~ 32069464 (-)
AMCG00021830 eny2,LOC100694417,LOC103393926 other downstream 3658083 31129583 ~ 31132185 (-)
G89217 kif13a,LOC101479097,LOC102301062,LOC102786386 other upstream 565414 35375016 ~ 35395771 (-)
G89368 NA other upstream 1134150 35943752 ~ 35946984 (-)
AMCG00021895 LOC102226217,LOC106946249,LOC103472391,LOC107092461,LOC103135126,LOC106918615,LOC105905342,LOC104924555,LOC108426791,LOC100705487 other upstream 1605277 36414879 ~ 36438350 (-)
AMCG00021896 tmem170b,LOC107734028,LOC107669975 other upstream 1714907 36524509 ~ 36537718 (-)
AMCG00021897 smim13,si:dkey-206d17.5,LOC107559689,LOC107551766 other upstream 1867504 36677106 ~ 36687642 (-)

Expression


Co-expression Network