AMCG00021905


Basic Information

Item Value
gene id AMCG00021905
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 37091198 ~ 37171379 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021905
atggctgacagcATCCCACTGCACCTGGTGCGGAAGAACTCGAAAAAAATCGCCTATTACAACTCCGGGAGACACACCAGATATGAAGTGGAAGATGAGTCATCCCACTTGGATGAGATGCCCCTGATGATGTCAGAAGAAGGCTTTGAAAATGATGAGAGTGATTATCACACCCTGCCTAGGGCCCGGGGCTTCGTTCTGGCAGTTACAATGGTGCGTGAGGCTGTGGATGAAGTGCGTCGCTGCCGACGAGACAAGGAAATGAATTCGCAGATGTACAGCAAACTCACAGTACGAGGTAAAGTTCAAGTGAAGAGCTCAGATATTGAAGTTGGGGACCTAATAATTGTTGAAAAGTGCTTCTGCTGTATTCAGATACTTTGTACTATTGTGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021905 True 396 mRNA 0.47 5 37091198 37171379

Neighbor

gene id symbol gene type direction distance location
AMCG00021904 NA coding downstream 91558 36992851 ~ 36999640 (-)
AMCG00021903 atp9b coding downstream 116082 36944033 ~ 36975116 (-)
AMCG00021901 NA coding downstream 216988 36867843 ~ 36874210 (-)
AMCG00021902 LOC108435486,LOC106605067 coding downstream 245565 36836428 ~ 36845633 (-)
AMCG00021898 NA coding downstream 465962 36622531 ~ 36625236 (-)
AMCG00021906 sall3,LOC103388658,LOC102796582,LOC103369140 coding upstream 41237 37212616 ~ 37234841 (-)
AMCG00021907 galr1,LOC107373077,LOC102797365 coding upstream 786376 37957755 ~ 37958533 (-)
AMCG00021909 NA coding upstream 1008701 38180080 ~ 38224604 (-)
AMCG00021908 NA coding upstream 1066759 38238138 ~ 38245037 (-)
AMCG00021913 tshz1,LOC107592027,LOC107748691,LOC107696938,LOC107593600 coding upstream 1648032 38819411 ~ 38826295 (-)
G89431 NA non-coding downstream 579267 36511599 ~ 36511931 (-)
G89428 NA non-coding downstream 589370 36498194 ~ 36501828 (-)
G89373 NA non-coding downstream 1105937 35967119 ~ 35985261 (-)
G89359 NA non-coding downstream 1197484 35852036 ~ 35893714 (-)
G89272 LOC101154678 non-coding downstream 1273577 35817366 ~ 35817621 (-)
G89539 NA non-coding upstream 87164 37258543 ~ 37258818 (-)
G89549 NA non-coding upstream 295402 37466781 ~ 37467591 (-)
G89553 NA non-coding upstream 393595 37564974 ~ 37565215 (-)
G89559 NA non-coding upstream 443018 37614397 ~ 37614596 (-)
G89562 NA non-coding upstream 589438 37760817 ~ 37761021 (-)
AMCG00021897 smim13,si:dkey-206d17.5,LOC107559689,LOC107551766 other downstream 403556 36677106 ~ 36687642 (-)
AMCG00021896 tmem170b,LOC107734028,LOC107669975 other downstream 553480 36524509 ~ 36537718 (-)
AMCG00021895 LOC102226217,LOC106946249,LOC103472391,LOC107092461,LOC103135126,LOC106918615,LOC105905342,LOC104924555,LOC108426791,LOC100705487 other downstream 652848 36414879 ~ 36438350 (-)
G89368 NA other downstream 1144214 35943752 ~ 35946984 (-)
G89217 kif13a,LOC101479097,LOC102301062,LOC102786386 other downstream 1695427 35375016 ~ 35395771 (-)
G89598 NA other upstream 1090008 38261387 ~ 38283855 (-)
G89611 NA other upstream 1224192 38395571 ~ 38397755 (-)
AMCG00021918 cndp2,LOC103371436,LOC104951856,LOC105892098,LOC106958632,LOC106588296,LOC102776275 other upstream 2084500 39255879 ~ 39276056 (-)
G89765 NA other upstream 2314454 39485833 ~ 39486288 (-)
AMCG00021924 eppk1,LOC106938278,LOC107592034 other upstream 2315518 39486897 ~ 39548802 (-)

Expression


Co-expression Network