G89004 (LOC107685553,LOC107596751,LOC107743232,LOC107662664,LOC108270036)


Basic Information

Item Value
gene id G89004
gene name LOC107685553,LOC107596751,LOC107743232,LOC107662664,LOC108270036
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 34346988 ~ 34380295 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU111038
GTAAATAGTTAATAACGTAGTGGTGGTAGTGGTAGTGCTGTTGTTATAAATATCCAAGCTATGAAATCAAAAATTGATTGAAAACTAAAGTGAAATTctatatttgcttttctttgcagAAATATTCTGACCTTAATGAACACTTTTGATCTGTCTGAAGCTAACATAACTGAACACACCTACAAAGATGTTCTTGGGCAACTGAACAGCACATTTCCAGCCGTCATTCAAAATCTTACTCTTAAAACCTGTGACCTCAATAGTTTTCTAAGTGAAgGTGTGGAAGGAACTGGCCTTGCATTCATCGTCTTCACTGAAGCAATTATGAAGATGCCAGTGTCCCCATTGTGGTCCATTTTGTTCTTTATCATGCTGTTCTGTCTCGGTCTGTCGTCTATGTTTGGCAATATTGAAGGAGTCCTTGTGCCTCTTCAGGACTTAAAGGTTTTTCCCAAATCATGGCCCAAGGAGCTCATAACTGgCACCATATGTCTTGTGTCTCTTCTGATCGCCTTGATATTTGTTCAGCAATCTGGGAATTATTGGCTGGCACTATTTGACAACTTTGCTGGTTCCATTCCTCTGCTGATCATTGCTTTCTGTGAAATGGTTGGAGTGGTATACATTTATGGAATAGACAGGTTTAACAAAGACATTGAATTTATGATCGGAC
>TU111040
GAGAAATAGAAGGAAGGAAGCTCTTAAGGGAAGACAGCACTGCTAACTACTGTTGCAAATATCCATACAGTCAATATGTATCTTAATCAGAATTAATGTAGCTTGATAAAATATCTGTACAAATGGTATGTGCATGTTGACTTGTggtgcaaatatttattttctagtaaTAATTGTGAGAAGGATGCTGTCATCGTTTCCATCATCAACGGCCTAACATCCATTTACGCTGCCACTGTAATATACTCCATCATCGGATTCCGAGCAACTGAGAGATATGACGACTGTGTTAATGGAAATATTCTGACCCTAATGAACACTTTTGATCTGTCTGAAGCTAACATTACTGAACACACCTACAATGATGTTCTCGGACAACTGAACAGCACATTTCCAGCGGTCATTCAAAATCTTTCTCTTAAAACCTGTGACCTCAATAGTTTTCTAAGTGAAgGTGTGGAAGGAACTGGCCTTGCATTCATCGTCTTCACTGAAGCAATTACTAAGATGCCAGTGTCCCCATTGTGGTCCATTTTGTTCTTTATCATGCTGTTCTGTCTCGGTCTGTCATCCATGTTTGGCAATATTGAAGGAGTCATTGTGCCTCTTCAGGACTTAAAGGCTTTTCCCAAGTCATGGCCCAAGGAGCTCATAACTGgcaCCATATGTCTGGTGTGTTTTCTGATCGCCTTGATATTTGTCCAGCAATCTGGGAATTATTGGCTGGCGCTGTTTGACAGCTTTGCTGGGTCCATTCCTCTGCTGATCATTGCTTTCTGTGAAATGGTTGGAGTGGTGTACATTTATGGAATAGACAGGTTTAACAAAGACATTGAATTTATGATCGGAC

Function

NR:

description
PREDICTED: sodium-dependent neutral amino acid transporter B(0)AT1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111038 False 673 TUCP 0.39 4 34346988 34380295
TU111040 True 850 TUCP 0.41 5 34346988 34351125

Neighbor

gene id symbol gene type direction distance location
AMCG00021863 LOC107751906 coding downstream 72277 34263815 ~ 34274711 (-)
AMCG00021865 NA coding downstream 86592 34251674 ~ 34260396 (-)
AMCG00021864 NA coding downstream 97341 34242865 ~ 34249647 (-)
AMCG00021860 LOC107748562 coding downstream 157462 34179592 ~ 34189526 (-)
AMCG00021861 NA coding downstream 332098 34006659 ~ 34014890 (-)
AMCG00021870 NA coding upstream 365408 34745703 ~ 34757627 (-)
AMCG00021878 grina coding upstream 386557 34766852 ~ 34784712 (-)
AMCG00021879 NA coding upstream 409973 34790268 ~ 34809602 (-)
AMCG00021877 vps28,LOC107696523,LOC107592928 coding upstream 430861 34811156 ~ 34820379 (-)
AMCG00021885 kif13a coding upstream 930994 35311289 ~ 35351633 (-)
G89003 NA non-coding downstream 999 34344635 ~ 34345989 (-)
G88991 NA non-coding downstream 60686 34284384 ~ 34286302 (-)
G88939 NA non-coding downstream 169507 34177047 ~ 34177481 (-)
G88918 NA non-coding downstream 366160 33976080 ~ 33980828 (-)
G88883 NA non-coding downstream 501536 33845114 ~ 33845452 (-)
G89011 NA non-coding upstream 39465 34419760 ~ 34420279 (-)
G89130 NA non-coding upstream 699278 35079573 ~ 35081173 (-)
G89212 NA non-coding upstream 989811 35370106 ~ 35370480 (-)
G89240 NA non-coding upstream 1024762 35405057 ~ 35405340 (-)
G89247 NA non-coding upstream 1074272 35454567 ~ 35455198 (-)
AMCG00021849 NA other downstream 2277524 32063385 ~ 32069464 (-)
AMCG00021830 eny2,LOC100694417,LOC103393926 other downstream 3214803 31129583 ~ 31132185 (-)
AMCG00021820 NA other downstream 3458400 30877848 ~ 30888588 (-)
G88527 NA other downstream 3922376 30337583 ~ 30424612 (-)
G88405 dtbp1,dtnbp1,LOC106596829,LOC106606149,LOC106596393 other downstream 4604180 29730077 ~ 29742808 (-)
G89217 kif13a,LOC101479097,LOC102301062,LOC102786386 other upstream 994721 35375016 ~ 35395771 (-)
G89368 NA other upstream 1563457 35943752 ~ 35946984 (-)
AMCG00021895 LOC102226217,LOC106946249,LOC103472391,LOC107092461,LOC103135126,LOC106918615,LOC105905342,LOC104924555,LOC108426791,LOC100705487 other upstream 2034584 36414879 ~ 36438350 (-)
AMCG00021896 tmem170b,LOC107734028,LOC107669975 other upstream 2144214 36524509 ~ 36537718 (-)
AMCG00021897 smim13,si:dkey-206d17.5,LOC107559689,LOC107551766 other upstream 2296811 36677106 ~ 36687642 (-)

Expression


Co-expression Network